Annotation and Ranking of Structural Variation
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Updated
Aug 8, 2024 - Tcl
Annotation and Ranking of Structural Variation
VIP for AXI Protocol
A tool for simulating random mutations in any genome
Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), add synteny among genome fragments or add crosslink among features, add short(PE/MP)/long reads(pacbio or nanopore) mapping or snpindel in vcf(not support complex sv yet), support all CIGAR of sam alignment, dire…
A simple script to create a customizable html file from an AnnotSV output.
CADD-SV – a framework to score the effect of structural variants
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Snakemake pipeline for SV discovery and analysis
trackc aims to produce beautiful genome tracks that are highly customizable
an infrastructure to implement arbitrary indirect registers on top of uvm
An integrated retroduplication caller based on 1) exon-exon junction and 2) discordant reads
Atom-linter provider that runs vcs and parses output. This can be used as a systemverilog (/verilog/vhdl) linter.
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