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@tpaklab

tpaklab

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  1. pathospot-compare pathospot-compare Public

    Compare whole genome sequences of pathogens to detect potential outbreaks

    Python 7 1

  2. pathospot-visualize pathospot-visualize Public

    Interactively visualize data from pathoSPOT-compare to find potential outbreaks

    JavaScript 6

  3. nosocomial-covid-uk nosocomial-covid-uk Public

    Code and data for Pak et al. JAMA Intern Med 2023

    Jupyter Notebook

  4. llacie llacie Public

    Large Language Model Clinical Information Extractor

    Python

  5. stz-ipw stz-ipw Public

    IPW analyses for the Sepsis Time Zero project

    R

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