A simple approach for maximizing the overlap of phylogenetic and comparative data
This repo contains tex files for our manuscript and R code to reproduce all example analyses. The paper describes two packages phyndr and taxonlookup (the source code for the packages are in their own repos; links above).
The analyses contained in the paper can be reproduced using the remake R package.
A vignette, which works through the basic functionality of both phyndr and taxonlookup, is available here.
## Install devtools if you do not have it ## install.packages("devtools") ## Install remake devtools::install_github("richfitz/remake") ## Re-run the analysis with remake remake::install_missing_packages() remake::make()