The {tdapseudotime} 📦 contains functions to implement the temporal phenotyping via topological data analysis of EHR COVID-19 data from the 4CE consortium.
You can install the development version of tdapseudotime from GitHub with remotes:
# install.packages('remotes') # uncomment to install devtools
remotes::install_github('trang1618/tdapseudotime')For detailed instruction on how to deploy the TDA algorithm on your site data, please visit the vignettes – train or test depending on the site.
Please open an issue for questions related to tdapseudotime usage, bug reports or general inquiries.
Thank you very much for your support!