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Tskit developers

Software for the creation and analysis of tree-sequences.


  1. tskit Public

    Population-scale genomics

    Python 118 62

  2. msprime Public

    Simulate genealogical trees and genomic sequence data using population genetic models

    Python 150 81

  3. tsinfer Public

    Infer a tree sequence from genetic variation data.

    C 44 11

  4. tsdate Public

    Infer the age of ancestral nodes in a tree sequence.

    Python 14 6

  5. tutorials Public

    A set of tutorials for msprime and tskit.

    Jupyter Notebook 14 13

  6. kastore Public

    The key-array store for read-only numerical data.

    C 2 7


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