Skip to content

Conversation

@benjeffery
Copy link
Member

FIxes #748 by relaxing the constraint on mutation times to allow mixtures of known/unknown as long as they are on different sites.

@codecov
Copy link

codecov bot commented Aug 10, 2020

Codecov Report

Merging #761 into master will increase coverage by 0.00%.
The diff coverage is 100.00%.

Impacted file tree graph

@@           Coverage Diff           @@
##           master     #761   +/-   ##
=======================================
  Coverage   87.69%   87.69%           
=======================================
  Files          24       24           
  Lines       19387    19388    +1     
  Branches     3640     3640           
=======================================
+ Hits        17001    17002    +1     
  Misses       1297     1297           
  Partials     1089     1089           
Flag Coverage Δ
#c_tests 85.28% <100.00%> (+<0.01%) ⬆️
#python_c_tests 90.16% <ø> (ø)
#python_tests 99.02% <ø> (ø)

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
c/tskit/core.c 94.08% <ø> (ø)
c/tskit/tables.c 81.17% <100.00%> (+<0.01%) ⬆️

Continue to review full report at Codecov.

Legend - Click here to learn more
Δ = absolute <relative> (impact), ø = not affected, ? = missing data
Powered by Codecov. Last update f787e1f...1e9f7ac. Read the comment docs.

Copy link
Member

@jeromekelleher jeromekelleher left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

LGTM, just needs a minor tweak in the loop logic.

@benjeffery benjeffery force-pushed the mixed_time_check_per_site branch from 0005652 to 1cf3d3a Compare August 10, 2020 23:01
Copy link
Member

@jeromekelleher jeromekelleher left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

LGTM, thanks @benjeffery !

@AdminBot-tskit AdminBot-tskit force-pushed the mixed_time_check_per_site branch from 1cf3d3a to 1e9f7ac Compare August 11, 2020 07:29
@mergify mergify bot merged commit 955c900 into tskit-dev:master Aug 11, 2020
@benjeffery benjeffery deleted the mixed_time_check_per_site branch August 27, 2020 14:28
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

Mixed missing and non-missing mutation times clarification

2 participants