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README.md
_definitions.yaml
_settings.yaml
_terms.yaml
acknowledgement.yaml
aligned_reads_index.yaml
aliquot.yaml
case.yaml
clinical_test.yaml
core_metadata_collection.yaml
demographic.yaml
diagnosis.yaml
experiment.yaml
experimental_metadata.yaml
exposure.yaml
family_history.yaml
keyword.yaml
program.yaml
project.yaml
publication.yaml
read_group.yaml
read_group_qc.yaml
sample.yaml
slide.yaml
slide_count.yaml
slide_image.yaml
submitted_aligned_reads.yaml
submitted_copy_number.yaml
submitted_methylation.yaml
submitted_somatic_mutation.yaml
submitted_unaligned_reads.yaml
treatment.yaml

README.md

Proposed additional keywords

The schemas defined here follow jsonschema as closely as possbile, introducing new keywords as needed.

systemAlias

For implementation. Allows properties to be stored as different keywords. The property listed in the properties section is what the user will refer to it, and the systemAlias value is what it will be stored in the database as.

systemProperties

The property keys listed under systemProperties are properties that the submitter is not allowed to update.

parentType

The type of object that the parent relationship points to.