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UC Davis Bioinformatics Core

Popular repositories

  1. sickle sickle Public

    Forked from najoshi/sickle

    Windowed Adaptive Trimming for fastq files using quality

    C 25 8

  2. proc10xG proc10xG Public

    processing 10x genomics reads

    Python 22 12

  3. assemblathon2-analysis assemblathon2-analysis Public

    collection of scripts and commands used by Ian Korf, Keith Bradnam, and Joe Fass in the analysis of Assemblathon 2 entries (assemblies)

    Perl 20 22

  4. scythe scythe Public

    Forked from vsbuffalo/scythe

    A 3'-end adapter contaminant trimmer

    C 11 5

  5. scRNA_shiny scRNA_shiny Public

    scRNA-seq Shiny App

    R 10 6

  6. alignerviz alignerviz Public

    Forked from vsbuffalo/alignerviz

    A simple tool to visualize sequences using Vlachos et al's technique

    Python 8

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