Subtype and Stage Inference (SuStaIn) infers disease subtypes and their progression patterns from cross-sectional datasets.
If you use this code, please cite: https://doi.org/10.1038/s41467-018-05892-0.
See the example using simulated data in TestData/simulateddata.m
Questions, suggestions and improvements
A python version of SuStaIn with additional features is available at https://github.com/ucl-pond/pySuStaIn.