Bump the pipeline-submodules group across 1 directory with 2 updates #88
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Bumps the pipeline-submodules group with 2 updates in the / directory: [external/pipeline-Nextflow-module](https://github.com/uclahs-cds/pipeline-Nextflow-module) and [external/pipeline-Nextflow-config](https://github.com/uclahs-cds/pipeline-Nextflow-config). Updates `external/pipeline-Nextflow-module` from `ef40c10` to `12f28e4` - [Commits](uclahs-cds/pipeline-Nextflow-module@ef40c10...12f28e4) Updates `external/pipeline-Nextflow-config` from `bc3f67e` to `d404a8f` - [Release notes](https://github.com/uclahs-cds/pipeline-Nextflow-config/releases) - [Commits](uclahs-cds/pipeline-Nextflow-config@bc3f67e...d404a8f) --- updated-dependencies: - dependency-name: external/pipeline-Nextflow-module dependency-type: direct:production dependency-group: pipeline-submodules - dependency-name: external/pipeline-Nextflow-config dependency-type: direct:production dependency-group: pipeline-submodules ... Signed-off-by: dependabot[bot] <support@github.com>
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Bumps the pipeline-submodules group with 2 updates in the / directory: external/pipeline-Nextflow-module and external/pipeline-Nextflow-config.
Updates
external/pipeline-Nextflow-modulefromef40c10to12f28e4Commits
12f28e4Add bcf2vcf module (#53)de9adf9Merge pull request #51 from uclahs-cds/kpash-reorganize-process-logscb51edemake sample directoryd647093remove stray replace6189072standardize by removing replace('_','-')b1f2dceupdate process log naming standard to include workflow2413b40Merge pull request #49 from uclahs-cds/kpash-fix-process-log3567f9areorganize repo structure: create modules/SAMtools/* dircbb5661update README67523dcrename enclosing directory to be more descriptiveUpdates
external/pipeline-Nextflow-configfrombc3f67etod404a8fCommits
d404a8fMerge pull request #78 from uclahs-cds/kpash-update-container-optionsae7e712handle process level containerOptions appropriately07c99b8Merge pull request #73 from uclahs-cds/yashpatel-generalized-resource-handlera9b012aMerge pull request #74 from uclahs-cds/nwiltsie-add-tests-for-resource-handlerd6de126Propagate exception when tag load fails4227dd9Correct JSON format in README6edfefeAdd test for resource handling1bb6177Add mockito into test Docker imagea9d174eCast allocation to avoid fractional CPU allocations8b500b7Add conversion for memory in retryDependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting
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