ucscXena

Repositories

• XenaGoWidget

  Xena Gene Set Viewer (demo: http://xenademo.berkeleybop.io/xena)
  JavaScript BSD-3-Clause 3 0 13 0 Updated Aug 12, 2020

• xenaPython

  Python API for Xena Hub
  Python Apache-2.0 11 28 2 0 Updated Aug 6, 2020

• xena-web

  landing page
  JavaScript Apache-2.0 3 0 1 0 Updated Jul 30, 2020

• ucsc-xena-server

  Turn-key functional genomics data server.
  JavaScript Apache-2.0 6 4 6 (1 issue needs help) 1 Updated Jul 24, 2020

• tmpdownload
  Jupyter Notebook 0 0 0 0 Updated Jul 20, 2020

• wrangle

  data_wrangling
  Python 3 7 3 0 Updated Jun 24, 2020

• ucsc-xena-client

  Functional genomics browser
  JavaScript Apache-2.0 44 45 117 (23 issues need help) 0 Updated Jun 18, 2020

• cohortMetaData

  data cohort meta data displayed on xena cohort page; search by cohort tags
  Python Apache-2.0 2 2 0 0 Updated Jun 17, 2020

• gitbookdocs

  Documentation for our gitbook
  HTML 2 1 0 0 Updated Jun 2, 2020

• ucsc-xena-wasm

  wasm methods for UCSC xena
  C Apache-2.0 0 0 0 0 Updated May 21, 2020

• xenaH5

  python scripts for converting 10x genomics single cell RNAseq data to Xena dense matrix file
  Python Apache-2.0 0 0 0 0 Updated Mar 11, 2020

• kaplan-meier

  Basic kaplan-meier methods in javascript
  JavaScript Apache-2.0 3 4 0 2 Updated Nov 13, 2019

• xena-GDC-ETL

  Extract, transform and load GDC data onto UCSC Xena

  xena gdc
  Python Apache-2.0 6 7 6 8 Updated Sep 4, 2019

• fast-deep-equal

  Forked from epoberezkin/fast-deep-equal

  The fastest deep equality check with Date and RegExp support
  JavaScript MIT 59 0 0 0 Updated Apr 6, 2019

• ehmutable

  js immutable helpers looking vaguely like clojure
  JavaScript Apache-2.0 0 1 0 0 Updated Nov 1, 2018

• client-template

  react template for client-side development
  JavaScript Apache-2.0 0 1 0 0 Updated Sep 18, 2018

• bloomfilter.js

  Forked from joyghosh/bloomfilter.js

  Bloom filter implementation in javascript
  JavaScript 1 0 0 0 Updated Aug 15, 2018

• xena_datapages
  JavaScript Apache-2.0 1 0 0 0 Updated Nov 16, 2017

• prettier

  Forked from prettier/prettier

  Prettier is an opinionated code formatter.
  JavaScript MIT 2,450 0 0 0 Updated Oct 24, 2017

• TF_modules
  0 1 0 0 Updated Apr 12, 2017

• python-scripts
  Apache-2.0 1 0 1 0 Updated Mar 8, 2017

• static-interval-tree

  Fast overlapping interval queries in js.
  JavaScript Apache-2.0 2 0 0 0 Updated Dec 17, 2016

• babel-plugin-tailcall-optimization

  Forked from krzkaczor/babel-plugin-tailcall-optimization

  Tail call optimization for JavaScript!
  JavaScript MIT 7 0 0 0 Updated Nov 12, 2016

• wdio-sync

  Forked from webdriverio-boneyard/wdio-sync

  A WebdriverIO plugin. Helper module to run WebdriverIO commands synchronously.
  JavaScript MIT 25 0 0 0 Updated Oct 15, 2016

• xena-extension

  chrome extension for UCSC Xena visualizations
  Shell Apache-2.0 0 1 0 0 Updated Aug 3, 2016

• dcc-portal

  Data portal for exploring and accessing data
  JavaScript GPL-3.0 3 0 0 0 Updated Aug 3, 2016

• xena-integrations

  Components for embedding UCSC Xena visualizations in other applications.
  JavaScript Apache-2.0 0 0 0 0 Updated Jul 27, 2016

• xena-ghost-template
  CSS MIT 0 1 1 0 Updated May 31, 2016

• schema

  Experiment with js fluent schema
  JavaScript Apache-2.0 0 1 0 0 Updated Mar 23, 2016

• ga4gh-rxjs

  ga4gh client methods in javascript, via rxjs
  JavaScript Apache-2.0 0 0 0 0 Updated May 6, 2015