From 1ebea78a9aebfa70807c059c359b47530c6a6445 Mon Sep 17 00:00:00 2001 From: dkriti Date: Wed, 27 May 2015 14:58:43 -0400 Subject: [PATCH] ex-266 (jebene/dkriti) minor change to make travis pass on 3.4 --- jacquard/merge.py | 2 +- test/merge_test.py | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/jacquard/merge.py b/jacquard/merge.py index c541546..3178531 100644 --- a/jacquard/merge.py +++ b/jacquard/merge.py @@ -134,7 +134,7 @@ def _get_desired_format_tags(self): "format tags. Review inputs/usage and try again") raise utils.UsageError(msg, self.format_tag_regexes) - return format_tag_list + return sorted(format_tag_list) def _get_metaheader_subset(self): def _handle_format_metaheaders(metaheader): diff --git a/test/merge_test.py b/test/merge_test.py index 1384bff..4e2d34a 100644 --- a/test/merge_test.py +++ b/test/merge_test.py @@ -57,7 +57,7 @@ def test_gets_desired_format_tags(self): file_reader = MockFileReader("A.mutect.vcf", file_contents) merge_vcf_reader = merge.MergeVcfReader(file_reader, ".*") - self.assertEquals(["DP", "AF"], merge_vcf_reader.desired_format_tags) + self.assertEquals(["AF", "DP"], merge_vcf_reader.desired_format_tags) def test_gets_desired_format_tags_warnsIfUnusedRegex(self): file_contents = ["##metaheader1\n",