Repository for work related to Liu et al. "Active Learning Using Various Representations." Digital Discovery (in peer review, submitted 03/09/2024)
Install
Mamba. The
environment is contained in the environment.yml file. It's name is
active-learning so remove it if it already exists.
$ mamba env remove -n active-learning
Then create the new environment
$ mamba env create -f environment.yml
$ mamba activate active-learning
To test that things are working.
$ cd 2D
Edit config.yml and set n_iterations: 1 so that the job runs
quickly and then run
$ snakemake --cores 1
It should generate a file called plot.png in the job_name
directory defined in config.yml. Check that the plot looks
reasonable.