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Code and intermediate data used to generate figures and results for the manuscript describing the challenge.

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usnistgov/giab-pFDA-2nd-challenge

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Repository with code and analysis of the 2nd precisionFDA truth challenge, https://precision.fda.gov/challenges/10.

Intermediate data files used to generate manuscript figures and tables in data and data-raw directories along with data descriptors.
Rmarkdown files used to generate figures in analysis directory, output figures in figures directory. Pipeline used to calculate challenge input sequencing data in scripts/coverage_pipeline.

Please contact Nate Olson, nolson@nist.gov, with any questions about the code or data in this repository.

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Code and intermediate data used to generate figures and results for the manuscript describing the challenge.

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