Repository with code and analysis of the 2nd precisionFDA truth challenge, https://precision.fda.gov/challenges/10.
Intermediate data files used to generate manuscript figures and tables in data and data-raw directories along with data descriptors.
Rmarkdown files used to generate figures in analysis directory, output figures in figures directory.
Pipeline used to calculate challenge input sequencing data in scripts/coverage_pipeline.
Please contact Nate Olson, nolson@nist.gov, with any questions about the code or data in this repository.