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Molecular Information Systems Lab

UW MISL

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  1. puddle puddle Public archive

    A system for high-level, reliable programming of microfluidic devices

    Rust 37 10

  2. purpledrop purpledrop Public

    Newest iteration of PurpleDrop. Reimplemented in kicad5

    16 1

  3. data-nbt17 data-nbt17 Public

    Data for paper "Random Access in Large-Scale DNA Data Storage"

    12 2

  4. NanoporeTERs NanoporeTERs Public

    Code repository for 2019 NanoporeTERs paper.

    Jupyter Notebook 7 1

  5. Porcupine Porcupine Public

    Porcupine is a molecular tagging system to tag physical objects with DNA.

    Jupyter Notebook 7 2

  6. dna-nanopore-computing dna-nanopore-computing Public

    Analysis pipeline for running DNA circuits on the nanopore

    Jupyter Notebook 5

Repositories

Showing 10 of 47 repositories
  • cas9-similarity-search Public

    DNA similarity search using Cas9

    uwmisl/cas9-similarity-search’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 0 11 0 Updated May 15, 2025
  • HIPified-DTWax Public
    uwmisl/HIPified-DTWax’s past year of commit activity
    C++ 0 Apache-2.0 0 0 0 Updated Apr 13, 2025
  • PASTOR-sequencing Public
    uwmisl/PASTOR-sequencing’s past year of commit activity
    Jupyter Notebook 5 MIT 0 0 0 Updated Oct 18, 2024
  • syn_bio_vis Public

    An interactive tool for teaching and learning molecular programming.

    uwmisl/syn_bio_vis’s past year of commit activity
    JavaScript 0 MIT 1 0 0 Updated Aug 8, 2024
  • poretitioner Public
    uwmisl/poretitioner’s past year of commit activity
    Python 3 1 35 3 Updated Jul 23, 2023
  • Deep-Molecules Public

    Protein Sequence AutoEncoders

    uwmisl/Deep-Molecules’s past year of commit activity
    Jupyter Notebook 2 0 0 0 Updated May 25, 2023
  • purpledrop-software Public

    Controller software for the PurpleDrop digital microfluidics platform

    uwmisl/purpledrop-software’s past year of commit activity
    Rust 1 MIT 0 0 36 Updated Jan 5, 2023
  • pd-electrodeboard-pcb-v4 Public
    uwmisl/pd-electrodeboard-pcb-v4’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Sep 27, 2022
  • PorTis Public

    Code repository and replication package for PorTis paper

    uwmisl/PorTis’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Aug 26, 2022
  • dna-nanopore-computing Public

    Analysis pipeline for running DNA circuits on the nanopore

    uwmisl/dna-nanopore-computing’s past year of commit activity
    Jupyter Notebook 5 0 0 0 Updated Jul 13, 2022
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