Switch branches/tags
Nothing to show
Find file History
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
..
Failed to load latest commit information.
external
shared
workflows
.gitignore
LICENSE
README.md

README.md

Butler et al. (submitted)

Code used for the head direction model fitting procedure in Butler et al. (submitted)

Makes extensive use of the vandermeerlab codebase; please use this commit if you want to be sure you are using the same code that generated the results in the paper.

Once you have checked out the above code, set up your MATLAB path as follows:

restoredefaultpath; % start with clean slate
addpath(genpath('\GitHub\vandermeerlab\code-matlab\shared'));
addpath(genpath('\GitHub\papers\Butler_etal'));

The workflow for generating the results is as follows:

  • For the parameter recovery analysis, run MASTER_paramRecovery.m, followed by PLOT_paramRecovery.m

  • For the model fits to HD cell data, run MASTER_hdfit.m, followed by PLOT_hdfit.m

Also:

  • PLOT_examples.m to generate the insets in the model schematic