diff --git a/HISTORY.rst b/HISTORY.rst index a067082ef..9134a4451 100644 --- a/HISTORY.rst +++ b/HISTORY.rst @@ -23,6 +23,7 @@ End-User Summary - Properly display the clinvar annotations that we have in the database (#464). - Adjusting default frequency filters for "clinvar pathogenic" filter: remove all threshold (#464). - Adding note about difference with upstream Clinvar (#464). +- Switching scoring to MutationTaster 85 interface, added back MT 85 link-out alongside MT 2021 link-out (#509). Full Change List ================ @@ -41,6 +42,7 @@ Full Change List - Properly display the clinvar annotations that we have in the database (#464). - Adjusting default frequency filters for "clinvar pathogenic" filter: remove all threshold (#464). - Adding note about difference with upstream Clinvar (#464). +- Switching scoring to MutationTaster 85 interface, added back MT 85 link-out alongside MT 2021 link-out (#509). ------ v1.2.0 diff --git a/config/settings/base.py b/config/settings/base.py index 8c3a4f967..f6d51b8ea 100644 --- a/config/settings/base.py +++ b/config/settings/base.py @@ -540,7 +540,7 @@ def set_logging(level=None): # Varfish: MutationTaster URL VARFISH_MUTATIONTASTER_REST_API_URL = env.str( - "VARFISH_MUTATIONTASTER_REST_API_URL", "https://www.genecascade.org/MT2021/MT_API102.cgi", + "VARFISH_MUTATIONTASTER_REST_API_URL", "https://www.genecascade.org/MTc85/MT_API.cgi", ) VARFISH_MUTATIONTASTER_BATCH_VARS = env.int("VARFISH_MUTATIONTASTER_BATCH_VARS", 50) VARFISH_MUTATIONTASTER_MAX_VARS = env.int("VARFISH_MUTATIONTASTER_MAX_VARS", 500) diff --git a/variants/templates/variants/filter_result/row.html b/variants/templates/variants/filter_result/row.html index 8da881bce..5b133d89c 100644 --- a/variants/templates/variants/filter_result/row.html +++ b/variants/templates/variants/filter_result/row.html @@ -458,13 +458,27 @@ {% if entry.release == "GRCh37" %} - + + {% else %}