From 965fe35ae095cd0cb82201c74af3d4feafc10a66 Mon Sep 17 00:00:00 2001
From: Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>
Date: Wed, 16 Jun 2021 11:05:51 +0200
Subject: [PATCH] Adding migration to fix UNLOGGED tables problem.

---
 variants/migrations/0069_set_logged_table.py  |  2 +-
 .../migrations/0081_set_logged_table_again.py | 22 +++++++++++++++++++
 2 files changed, 23 insertions(+), 1 deletion(-)
 create mode 100644 variants/migrations/0081_set_logged_table_again.py

diff --git a/variants/migrations/0069_set_logged_table.py b/variants/migrations/0069_set_logged_table.py
index e25b4a51f..183696c14 100644
--- a/variants/migrations/0069_set_logged_table.py
+++ b/variants/migrations/0069_set_logged_table.py
@@ -1,5 +1,5 @@
 # -*- coding: utf-8 -*-
-"""SET small variant table as UNLOGGED to improve insertion performance."""
+"""SET small variant table as LOGGED to improve stability."""
 from __future__ import unicode_literals
 
 from django.db import migrations
diff --git a/variants/migrations/0081_set_logged_table_again.py b/variants/migrations/0081_set_logged_table_again.py
new file mode 100644
index 000000000..94f946005
--- /dev/null
+++ b/variants/migrations/0081_set_logged_table_again.py
@@ -0,0 +1,22 @@
+# -*- coding: utf-8 -*-
+"""SET small variant table as LOGGED to improve stability (#2)."""
+from __future__ import unicode_literals
+
+from django.db import migrations
+from django.conf import settings
+
+if not settings.IS_TESTING:
+    operations = [migrations.RunSQL("ALTER TABLE variants_smallvariant SET LOGGED;")] + [
+        migrations.RunSQL("ALTER TABLE variants_smallvariant_%d SET LOGGED" % i)
+        for i in range(settings.VARFISH_PARTITION_MODULUS_SMALLVARIANT)
+    ]
+else:
+    operations = []
+
+
+class Migration(migrations.Migration):
+    atomic = False
+
+    dependencies = [("variants", "0080_spanrsubmissionbgjob")]
+
+    operations = []