A project showcasing published datasets with matching DataJoint pipelines and NWB 2.0 export
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README.md

README.md

NWB-showcase

This project showcases published datasets with matching DataJoint pipelines and NWB 2.0 export capability.

Each showcase comprises the following:

  • Basic project summary
  • Instructions to download the data
  • The DataJoint pipeline to ingest the data
  • Scripts to export the data from the DataJoint pipeline into NWB 2.0 files.

License

This code and documentation can be distributed under the Creative Commons Attribution-ShareAlike 4.0 (CC-BY-SA-4.0) International License

The Datasets

1. Chen et al Neuron 2017

Publication: http://dx.doi.org/10.1016/j.neuron.2017.05.005

Data: https://dx.doi.org/10.6080/K0S180F9 (Not available)

Repository:

2. Guo/Inagaki et al Nature 2017

Publication: https://dx.doi.org/10.1038/nature22324

Data: https://dx.doi.org/10.6080/K03F4MH (Not available)

Repository:

3. Yu/Gutnisky et al Nat Neurosci 2016

Publication: https://dx.doi.org/10.1038/nn.4412

Data: https://doi.org/10.6080/K0T43R01

Repository: http://crcns.org/data-sets/ssc/ssc-7

4. Li/Daie et al Nature 2016

Publication: https://dx.doi.org/10.1038/nature17643

Data: https://dx.doi.org/10.6080/K04M92GX (Incorrect)

Repository: https://crcns.org/data-sets/motor-cortex/alm-3

5. Li et al Nature 2015 (a)

Publication: https://dx.doi.org/10.1038/nature14178, PMID 25731172

Data: https://dx.doi.org/10.6080/K0MS3QNT

Repository: https://crcns.org/data-sets/motor-cortex/alm-1

6. Li et al Nature 2015 (b)

Publication: https://doi.org/10.1038/nature14178

Data: http://dx.doi.org/10.6080/K04M92GX

Repository: http://crcns.org/data-sets/motor-cortex/alm-2

7. Hires, Gutnisky et al Elife 2015.

Publication: https://dx.doi.org/10.7554/eLife.06619

Data: http://dx.doi.org/10.6080/K0MG7MDV

Repository: https://crcns.org/data-sets/ssc/ssc-5

8. Inagaki et al 2018

Publication:

Data:

Repository:

9. Inagaki et al JNS 2018

Publication:

Data:

Repository:

10. Gao-2018

Publication: https://www.nature.com/articles/s41586-018-0633-x

Data: https://dx.doi.org/10.6080/K03F4MH2

Repository: http://crcns.org/data-sets/motor-cortex/alm-4/

11. Economo et al 2018, in press.

Publication:

Data:

Repository: