From bdc9e789c079f004f2de60a5bb158ef01153bf4b Mon Sep 17 00:00:00 2001
From: edisz <eduardszoecs@gmail.com>
Date: Thu, 2 Jul 2015 10:37:09 +0200
Subject: [PATCH] updated documentation

---
 man/anova.cca.Rd  |  5 ++++-
 man/permustats.Rd | 11 +++++------
 2 files changed, 9 insertions(+), 7 deletions(-)

diff --git a/man/anova.cca.Rd b/man/anova.cca.Rd
index baf242dcf..b1519c123 100644
--- a/man/anova.cca.Rd
+++ b/man/anova.cca.Rd
@@ -145,7 +145,10 @@
 
 \value{ 
   The function \code{anova.cca} calls \code{permutest.cca} and fills an
-  \code{\link{anova}} table.  
+  \code{\link{anova}} table. Additional attributes are 
+  \code{Random.seed} (the random seeds used), 
+  \code{\link[=how]{control}} (the permutation design) and 
+  \code{F.perm} (the permutet test statistics).
 }
 
 \note{
diff --git a/man/permustats.Rd b/man/permustats.Rd
index 22990e82c..53ac1abb9 100644
--- a/man/permustats.Rd
+++ b/man/permustats.Rd
@@ -2,6 +2,7 @@
 \alias{permustats}
 \alias{permustats.adonis}
 \alias{permustats.anosim}
+\alias{permustats.anova.cca}
 \alias{permustats.CCorA}
 \alias{permustats.envfit}
 \alias{permustats.factorfit}
@@ -91,13 +92,11 @@ permustats(x, ...)
   arguments to their underlying functions; see their documentation.
 
   The \code{permustats} can extract permutation statistics from the
-  results of \code{\link{adonis}}, \code{\link{anosim}},
-  \code{\link{mantel}}, \code{\link{mantel.partial}},
+  results of \code{\link{adonis}}, \code{\link{anosim}}, 
+  \code{\link{anova.cca}}, \code{\link{mantel}}, \code{\link{mantel.partial}},
   \code{\link{mrpp}}, \code{\link{oecosimu}}, \code{\link{ordiareatest}},
   \code{\link{permutest.cca}}, \code{\link{protest}}, and
-  \code{\link{permutest.betadisper}}. NB, there is no \code{permustats}
-  method for \code{\link{anova.cca}}, but only for
-  \code{\link{permutest.cca}}.
+  \code{\link{permutest.betadisper}}. 
 
 }
 
@@ -115,7 +114,7 @@ permustats(x, ...)
   Jari Oksanen with contributions from Gavin L. Simpson
   (\code{permustats.permutest.betadisper} method and related
   modifications to \code{summary.permustats} and the \code{print}
-  method.
+  method) and Eduard Szöcs (\code{permustats.anova.cca).}
 }
 
 \seealso{