Wasabi is a web-based tool for evolutionary sequence analysis. Homepage: http://wasabiapp.org
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wasabi_server.py

README.md

Wasabi

Web-based environment for evolutionary sequence analysis and data visualisation.
Wasabi visualises sequence data together with a phylogenetic tree within a modern, user-friendly interface.
It automatically stores intermediate analysis steps with data sharing links, supports PRANK and PAGAN aligners and is extendable with plugins. For more information, visit Wasabi homepage or read the publication.

Setup

Wasabi can run both as a web service or standalone application, depending on the network setup
(web browser access by outside world).

  • Basic mode: open index.html in Wasabi folder
  • Full mode: launch server module python wasabi_server.py

Citation

To cite Wasabi in publications, please use:
Veidenberg, A., Medlar, A. and Löytynoja, A. (2015) Wasabi: an integrated platform for evolutionary sequence analysis and data visualisation. Mol. Biol. Evol.

Licence

Wasabi is open-source and licenced under the AGPL licence: GNU homepage.