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VIDJIL_ALGO_SRC = algo/
VIDJIL_BROWSER_SRC = browser/
VIDJIL_SERVER_SRC = server/
TEE = python tools/tee.py -v
algo:
$(MAKE) -C algo
test_browser: unit_browser functional_browser
test_server: unit_server
test_tools_if_python:
@((python tools/check_python_version.py && $(MAKE) test_tools) || (python tools/check_python_version.py || echo "!!! Bad python version, we skip tools tests..."))
test_tools:
$(MAKE) -C tools/tests
shouldvdj_generate:
@echo
rm -rf data/gen
mkdir -p data/gen
cd germline ; python generate-recombinations.py --random-deletions 8,4:3,1:5,3 --random-insertions 5,4 -e .01
### Browser tests
unit_browser:
$(MAKE) -C browser/test unit
functional_browser:
$(MAKE) -C browser/test functional
headless_browser:
$(MAKE) -C browser/test headless
unit_server:
$(MAKE) -C server/ unit
###
data:
$(MAKE) -C algo/tests/data
demo germline browser server: %:
$(MAKE) -C $@
cleanall: clean
$(MAKE) -C algo/tests/data $^
$(MAKE) -C germline $^
$(MAKE) -C $(VIDJIL_ALGO_SRC) cleanall
$(MAKE) -C server cleanall
.PHONY: all test should clean cleanall distrib data demo germline unit_coverage should_coverage coverage data germline browser server doc algo
# Browser
RELEASE_JS = $(VIDJIL_BROWSER_SRC)/js/release.js
RELEASE_BROWSER_ARCHIVE = vidjil-browser-$(RELEASE_TAG).tgz
DIST_BROWSER_DIR=vidjil-browser-$(RELEASE_TAG)
TEST_FILES_BROWSER= Makefile $(VIDJIL_BROWSER_SRC)/test/Makefile $(wildcard $(VIDJIL_BROWSER_SRC)/test/*.rb) $(wildcard $(VIDJIL_BROWSER_SRC)/test/QUnit/*) $(wildcard $(VIDJIL_BROWSER_SRC)/test/QUnit/testFiles/*.js)
RELEASE_FILES_BROWSER=$(TEST_FILES_BROWSER) $(wildcard $(VIDJIL_BROWSER_SRC)/*.html) $(wildcard $(VIDJIL_BROWSER_SRC)/js/*.js) $(wildcard $(VIDJIL_BROWSER_SRC)/js/lib/*.js) $(wildcard $(VIDJIL_BROWSER_SRC)/css/*.css)
release_browser:
$(info ==== Browser Release $(RELEASE_TAG) ====)
# Tag the release
if test "$(RELEASE_TAG)" != "notag"; then \
git tag -f release-$(RELEASE_TAG); \
echo 'RELEASE_TAG = "$(RELEASE_TAG)"' > $(RELEASE_JS); \
fi
mkdir -p release
rm -rf release/$(RELEASE_BROWSER_ARCHIVE) release/$(DIST_BROWSER_DIR)
mkdir -p release/$(DIST_BROWSER_DIR)
for file in $(RELEASE_FILES_BROWSER); do\
dir=release/$(DIST_BROWSER_DIR)/`dirname "$$file"`; \
mkdir -p $$dir; \
cp "$$file" $$dir; \
done
cd release && tar cvzf $(RELEASE_BROWSER_ARCHIVE) $(DIST_BROWSER_DIR) \
&& rm -rf $(DIST_BROWSER_DIR)
# Untag the source
rm -f $(RELEASE_JS) ; touch $(RELEASE_JS)
# Check archive
cd release && tar xvfz $(RELEASE_BROWSER_ARCHIVE)
cd release/$(DIST_BROWSER_DIR) && $(MAKE) unit_browser