VISTASOFT is the main software repository of the VISTA lab at Stanford University.
Routines for teaching MRI principles in Stanford's Psych 204A
Matlab tutorials for courses in reading, image science, and MR
A repository for vistalab docker files
Method for encoding brain connectomes in multidimensional arrays (tensors).
ITKGray Branch of ITKSnap Src
Analyzing visual field coverage (field of view) in ventral occipital cortex. Emphasis on reading circuitry
JSONio: a MATLAB JSON library
Matlab implementation of ConTrack_score
Includes source code for ConTrack, Quench, DTIQuery and other tools
Image quality for diffusion weighted imaging
Data Readers and Writers
Data Management Web GUI [defunct]
Elastic Basis Pursuit
Read, modify and write DICOM files with python code
The bridge between MITK diffusion and vistasoft.
Reading and writing .pdb tractography files, in python
Models for diffusion data
label an ROI from an anatomical scan
MatLab routines for validating white-matter connectomes generated using diffusion-weighted imaging.
Resampling dwi directions
This repository contains the Matlab code to replicate key results from the published paper: Human Trichromacy Revisited
MATLAB utility functions written by Kendrick Kay
Source code for buildMesh and mrMeshSrv
Simulations for color blind observers and color discrimination