A vivarium wrapper process for the COBRApy library.
COBRA_FBA
can be loaded with BiGG models, and has been primarily used with BiGG model iAF1260b.
The project includes CobraComposite
, which adds auxiliary processes MassDeriver
and VolumeDeriver
to make a type of dynamic FBA. Other processes can constrain individual fluxes in COBRA_FBA
through
the flux_bounds port, allowing for a type of integrative FBA.
$ pip install -r requirements.txt