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Tools to process and analyze deep sequencing data.
HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.
Customizable workflows based on snakemake and python for the analysis of NGS data
python module to plot beautiful and highly customizable genome browser tracks
Scripts to import your FeatureCounts output into DEXSeq
R/Bioconductor package for analysis of single and paired-end capped-RNAseq data (CAGE/RAMPAGE/MAPCap)
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