VIP - Vortex Image Processing package
--------------------------------------------------- oooooo oooo ooooo ooooooooo. `888. .8' `888' `888 `Y88. `888. .8' 888 888 .d88' `888. .8' 888 888ooo88P' `888.8' 888 888 `888' 888 888 `8' o888o o888o --------------------------------------------------- Vortex Image Processing package ---------------------------------------------------
VIP is a python package for angular, reference star and spectral
differential imaging for exoplanet/disk detection through high-contrast imaging.
VIP is compatible with Python 2.7, 3.6 and 3.7.
The goal of
VIP is to incorporate open-source, efficient, easy-to-use and
well-documented implementations of high-contrast image processing algorithms to
the interested scientific community. The main repository of
VIP resides on
GitHub, the standard for scientific
open source code distribution, using Git as a version control system.
VIP started as the effort of Carlos Alberto Gomez Gonzalez,
a former PhD student of the VORTEX team
VIP's development is led by C. Gomez with contributions
made by collaborators from several teams (take a look at the contributors tab on
VIP's GitHub repository). Most of
VIP's functionalities are mature but
it doesn't mean it's free from bugs. The code is continuously evolving and
therefore feedback/contributions are greatly appreciated. If you want to report
a bug or suggest a functionality please create an issue on GitHub. Pull
requests are very welcomed!
The documentation for
VIP can be found here: http://vip.readthedocs.io.
Jupyter notebook tutorial
Tutorials, in the form of Jupyter notebooks, showcasing
VIP's usage and other resources such as test/dummy datasets are available on the
VIP-extras repository. Alternatively, you can execute this repository on Binder. The notebook for ADI processing can be visualized online with
nbviewer. If you are new to the Jupyter notebook application check out the beginner's guide.
TL;DR setup guide
$ pip install vip_hci
Installation and dependencies
The benefits of using a Python package manager (distribution), such as (ana)conda or Canopy, are many. Mainly, it brings easy and robust package management and avoids messing up with your system's default python. An alternative is to use package managers like apt-get for Ubuntu or Homebrew/MacPorts/Fink for macOS. I personally recommend using Miniconda.
VIP depends on existing packages from the Python ecosystem, such as
emcee. There are different ways of
VIP suitable for different scenarios.
The easiest way to install
VIP is through the Python Package Index, aka
PyPI, with the
pip package manager. Simply run:
$ pip install vip_hci
pip you can easily uninstall, upgrade or install a specific version of
VIP. For upgrading the package run:
$ pip install --upgrade vip_hci
Alternatively, you can use
pip install and point to the GitHub repo:
$ pip install git+https://github.com/vortex-exoplanet/VIP.git
Using the setup.py file
You can download
VIP from its GitHub repository as a zip file. A
file (setuptools) is included in the root folder of
VIP. Enter the package's
root folder and run:
$ python setup.py install
If you want to benefit from the
git functionalities, you need to clone the
repository (make sure your system has
$ git clone https://github.com/vortex-exoplanet/VIP.git
Then you can install the package by following the previous steps, using the setup.py file. Creating a fork with GitHub is recommended to developers or to users who want to experiment with the code.
OpenCV (Open source Computer Vision) provides fast C++ image processing
operations and is used by
VIP for basic image transformations. If you don't
OpenCV python bindings (
OpenCV is optional since
VIP will use the much slower
transparently. Fortunately, installing
OpenCV library is nowadays and easy
process that is done automatically with the
VIP installation. Alternatively,
you could use
$ conda install opencv
VIP contains a class
vip_hci.fits.ds9 that enables, through
the interaction with a DS9 window (displaying numpy arrays, controlling the
display options, etc).
pyds9 is an optional requirement and must be
installed from the latest development version:
$ pip install git+git://github.com/ericmandel/pyds9.git#egg=pyds9
Also, you can install the Intel Math Kernel Library (MKL) optimizations
(provided that you have a recent version of
libraries. Either of them can be installed with
conda install. This is
recommended along with
OpenCV for maximum speed on
VIP offers the possibility of computing SVDs on GPU by using
(starting from version 0.8.0) or
PyTorch (from version 0.9.2). These remain
as optional requirements, to be installed by the user, as well as a proper CUDA
environment (and a decent GPU card).
Finally, start Python (or IPython or a Jupyter notebook if you prefer) and check
that you are able to import
import vip_hci as vip
If everything went fine with the installation, you will see a welcome message. Now you can start finding exoplanets!
Please subscribe to our mailing list
if you want to be informed of
VIP's latest developments (new versions
Please cite Gomez Gonzalez et al. 2017 (http://iopscience.iop.org/article/10.3847/1538-3881/aa73d7/)
whenever you publish data reduced with
VIP. Astrophysics Source Code Library