@voytekresearch

Not a Polish bear.

Data and pretty good code from the Voytek Laboratory.

Pinned repositories

  1. VoytekLab

    The who, what, and where of Voytek Lab code.

    8 2

  2. Resources

    Resources & starter kits for the Voytek lab.

  3. tutorials

    Learn to do common Voytek Lab things.

    Jupyter Notebook 44 10

  4. fooof

    Parameterizing neural power spectra - fitting oscillatory peaks and 1/f background.

    Jupyter Notebook 37 12

  5. neurodsp

    Tools for the Voytek Lab and friends to analyze neural time series.

    Jupyter Notebook 21 10

  6. fakespikes

    Model spiking as a statistical process, in Python.

    Python 1 1

  • Parameterizing neural power spectra - fitting oscillatory peaks and 1/f background.

    Jupyter Notebook 37 12 Apache-2.0 Updated Jul 19, 2018
  • Resources & starter kits for the Voytek lab.

    Updated Jul 18, 2018
  • Tools for the Voytek Lab and friends to analyze neural time series.

    Jupyter Notebook 21 10 MIT Updated Jul 15, 2018
  • A Matlab wrapper for FOOOF, and other support utilities for using FOOOF with Matlab.

    Jupyter Notebook 1 2 Updated Jul 13, 2018
  • Who are we? What do we study? HOW? WHY? ARRGHHH!!?!?

    Jupyter Notebook 1 Updated Jul 11, 2018
  • A collection of openly available datasets in (mostly human) electrophysiology.

    20 2 Updated Jul 10, 2018
  • Statistics helper functions

    Python Updated Jul 4, 2018
  • The who, what, and where of Voytek Lab code.

    8 2 MIT Updated Jul 1, 2018
  • Calculate phase-amplitude coupling in Matlab (relies on https://github.com/voytekresearch/pacpy).

    Matlab 2 MIT Updated Jun 30, 2018
  • Code for analyzing multi-electrode array recordings (spikes & LFP) for Trujillo, Gao, Negraes et al., 2018.

    Matlab Updated Jun 26, 2018
  • Spectral Coefficient of Variation for separating noise and structure in neural data

    Jupyter Notebook 1 MIT Updated Jun 15, 2018
  • Analysis code used to create figures in Cole et al., 2017, J Neuro

    Jupyter Notebook 2 Updated Apr 27, 2018
  • Model spiking as a statistical process, in Python.

    Python 1 1 MIT Updated Apr 17, 2018
  • Analysis code to create the figures in "Cycle by cycle analysis of neural oscillations"

    Jupyter Notebook 3 Updated Apr 16, 2018
  • Modeling the adversarial relationship between oscillation and neural computation.

    Jupyter Notebook MIT Updated Apr 6, 2018
  • Models and data for, 'A unified mechanism for visual cortical alpha rhythms'.

    Jupyter Notebook MIT Updated Apr 5, 2018
  • A detailed look at the synchronization and coding fidelity of gamma oscillations

    Jupyter Notebook 1 MIT Updated Mar 29, 2018
  • psd_fit Archived

    Algorithm to fit 1/f and oscillatory components to PSD

    Jupyter Notebook 4 MIT Updated Jan 4, 2018
  • Matlab 1 GPL-3.0 Updated Nov 27, 2017
  • Learn to do common Voytek Lab things.

    Jupyter Notebook 44 10 Updated Sep 28, 2017
  • Calculate phase-amplitude coupling in Python (and Matlab).

    Jupyter Notebook 13 8 MIT Updated Sep 5, 2017
  • Analysis code used to create figures in Gao et al., 2017

    Matlab 2 1 Updated Jul 5, 2017
  • Analyze the waveform shape of neural oscillations.

    Jupyter Notebook 11 3 MIT Updated Jun 26, 2017
  • Toy simulations to try and better interpret peak bandwidth in power spectra.

    Jupyter Notebook MIT Updated Feb 13, 2017
  • Create simple LFP simulations, with 1/F^chi noise.

    Jupyter Notebook MIT Updated Oct 28, 2016
  • pycog

    Forked from frsong/pycog

    Train excitatory-inhibitory recurrent neural networks for cognitive tasks.

    Python 13 MIT Updated Oct 24, 2016
  • A very basic library for studying recurrence matrices.

    Jupyter Notebook Updated Aug 19, 2016
  • Spiking simulations of 'good' and 'bad' neural phase-amplitude coupling.

    Python Updated Aug 11, 2016
  • Allen and Yarkoni sitting in a tree, C-O-D-I-N-G.

    Jupyter Notebook 1 3 MIT Updated Jul 11, 2016
  • Python MIT Updated Jun 2, 2016