Source code for Generating Medical Subject Heading Over-Representation Profiles
Python Shell Perl R
Latest commit ea57031 Sep 30, 2012 Warren Cheung Merge ../digenei5

README.top

Quick Start

1. Unpack source files into directory (or clone the git repository)
2. Copy ./config.default.mk to ./config.mk
3. Edit ./config.mk to point to pubmed and Entrez files
4. Make a subdirectory ./tmp/ if it does not exist

Top level README file

List of directory contents
(WIP)

mesh_parse/	parse the NIH Medical Subject Heading XML files