JSON Variant Format
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csharp
json
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README.md

README.md

jvf

JSON Variant Format

JSON represenation of genomic variants for use in web services and document-oriented data structures.

Document URIs

Used to identify specific organizations/laboratories using a reverse FQDN.

OrganizationUri example: /organization/org.ynhh.labmed

SubjectURI: /subject/orgid/identifier

SpecimenURI: /specimen/orgid/caseid

PanelURI: /panel/orgid/panelid/YEARDEVELOPED

SpecimenCat: tumor, germline

InstrumentType:
    /instrument/iontorrent/pgm
    /instrument/illumina/hiseq
    /instrument/illumina/miseq

PipelineUri: /pipeline/orgid/yourpipelineid