diff --git a/environment-linux-64.lock b/environment-linux-64.lock index d58a7c6..1aabca6 100644 --- a/environment-linux-64.lock +++ b/environment-linux-64.lock @@ -3,31 +3,38 @@ # platform: linux-64 @EXPLICIT https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2021.10.8-ha878542_0.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/dcw-gmt-2.1.0-ha770c72_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2022.5.18.1-ha878542_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/dcw-gmt-2.1.1-ha770c72_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/font-ttf-dejavu-sans-mono-2.37-hab24e00_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/font-ttf-inconsolata-3.000-h77eed37_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/font-ttf-source-code-pro-2.038-h77eed37_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/font-ttf-ubuntu-0.83-hab24e00_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/gshhg-gmt-2.3.7-ha770c72_1003.tar.bz2 +https://conda.anaconda.org/conda-forge/noarch/kernel-headers_linux-64-2.6.32-he073ed8_15.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.36.1-hea4e1c9_2.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/libgfortran5-11.2.0-h5c6108e_16.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-11.2.0-he4da1e4_16.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/libgcc-devel_linux-64-11.2.0-h0952999_16.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/libgfortran5-12.1.0-hdcd56e2_16.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-devel_linux-64-11.2.0-h0952999_16.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-12.1.0-ha89aaad_16.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/mkl-include-2022.0.1-h8d4b97c_803.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/pandoc-2.18-ha770c72_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/poppler-data-0.4.11-hd8ed1ab_0.tar.bz2 https://conda.anaconda.org/pytorch/noarch/pytorch-mutex-1.0-cuda.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/tzdata-2022a-h191b570_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/fonts-conda-forge-1-0.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/libgfortran-ng-11.2.0-h69a702a_16.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/libgfortran-ng-12.1.0-h69a702a_16.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/libgomp-12.1.0-h8d9b700_16.tar.bz2 +https://conda.anaconda.org/conda-forge/noarch/sysroot_linux-64-2.12-he073ed8_15.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/binutils_impl_linux-64-2.36.1-h193b22a_2.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/fonts-conda-ecosystem-1-0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/binutils_linux-64-2.36-hf3e587d_9.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-2_kmp_llvm.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/libgcc-ng-11.2.0-h1d223b6_16.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/libgcc-ng-12.1.0-h8d9b700_16.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/aom-3.3.0-h27087fc_1.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/bzip2-1.0.8-h7f98852_4.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.18.1-h7f98852_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/charls-2.3.4-h9c3ff4c_0.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/cudatoolkit-11.3.1-ha36c431_10.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/cudatoolkit-11.3.1-h9edb442_10.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/expat-2.4.8-h27087fc_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/fftw-3.3.10-nompi_h77c792f_102.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/freexl-1.0.6-h7f98852_0.tar.bz2 @@ -51,6 +58,7 @@ https://conda.anaconda.org/conda-forge/linux-64/libffi-3.4.2-h7f98852_5.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libiconv-1.16-h516909a_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libnsl-2.0.0-h7f98852_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libpciaccess-0.16-h516909a_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/libsanitizer-11.2.0-he4da1e4_16.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libsodium-1.0.18-h36c2ea0_1.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libspatialindex-1.9.3-h9c3ff4c_4.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libuuid-2.32.1-h7f98852_1000.tar.bz2 @@ -67,7 +75,7 @@ https://conda.anaconda.org/conda-forge/linux-64/openssl-1.1.1o-h166bdaf_0.tar.bz https://conda.anaconda.org/conda-forge/linux-64/pcre-8.45-h9c3ff4c_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/pixman-0.40.0-h36c2ea0_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/pthread-stubs-0.4-h36c2ea0_1001.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/snappy-1.1.9-hbd366e4_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/snappy-1.1.9-hbd366e4_1.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/svt-av1-0.9.1-h27087fc_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/tbb-2021.5.0-h924138e_1.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/tzcode-2022a-h166bdaf_0.tar.bz2 @@ -83,7 +91,8 @@ https://conda.anaconda.org/conda-forge/linux-64/xorg-xproto-7.0.31-h7f98852_1007 https://conda.anaconda.org/conda-forge/linux-64/xz-5.2.5-h516909a_1.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/yaml-0.2.5-h7f98852_2.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/zfp-0.5.5-h9c3ff4c_8.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/blosc-1.21.1-hd32f23e_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/zlib-ng-2.0.6-h166bdaf_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/gcc_impl_linux-64-11.2.0-h82a94d6_16.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/gettext-0.19.8.1-h73d1719_1008.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/gnutls-3.6.13-h85f3911_1.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libavif-0.10.1-h166bdaf_0.tar.bz2 @@ -101,30 +110,34 @@ https://conda.anaconda.org/conda-forge/linux-64/xorg-fixesproto-5.0-h7f98852_100 https://conda.anaconda.org/conda-forge/linux-64/xorg-libsm-1.2.3-hd9c2040_1000.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/zeromq-4.3.4-h9c3ff4c_1.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/zlib-1.2.11-h166bdaf_1014.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.2-ha95c52a_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.2-h8a70e8d_1.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/blosc-1.21.1-h83bc5f7_3.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/boost-cpp-1.74.0-h6cacc03_7.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/brotli-bin-1.0.9-h166bdaf_7.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/c-blosc2-2.0.4-h5f21a17_1.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/c-blosc2-2.1.1-h7a311fb_2.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/gcc_linux-64-11.2.0-h39a9532_9.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/gxx_impl_linux-64-11.2.0-h82a94d6_16.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/hdf4-4.2.15-h10796ff_3.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/krb5-1.19.3-h3790be6_0.tar.bz2 https://conda.anaconda.org/rapidsai/linux-64/libcucim-22.02.00-cuda11_g29bfe6f_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libglib-2.70.2-h174f98d_4.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libnghttp2-1.47.0-h727a467_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libpng-1.6.37-h21135ba_2.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/libprotobuf-3.20.0-h6239696_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/libprotobuf-3.20.1-h6239696_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libssh2-1.10.0-ha56f1ee_2.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libtiff-4.3.0-h542a066_3.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libxml2-2.9.12-h885dcf4_1.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libzip-1.8.0-h4de3113_1.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/mkl-2022.0.1-h8d4b97c_803.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/openh264-2.1.1-h780b84a_0.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/sqlite-3.38.4-h4ff8645_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/sqlite-3.38.5-h4ff8645_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/xorg-libx11-1.7.2-h7f98852_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/brotli-1.0.9-h166bdaf_7.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/freetype-2.10.4-h0708190_1.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/gxx_linux-64-11.2.0-hacbe6df_9.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/lcms2-2.12-hddcbb42_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libblas-3.9.0-14_linux64_mkl.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/libcurl-7.83.0-h7bff187_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/libcurl-7.83.1-h7bff187_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libkml-1.3.0-h238a007_1014.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libpq-14.2-hd57d9b9_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libwebp-1.2.2-h3452ae3_0.tar.bz2 @@ -145,9 +158,9 @@ https://conda.anaconda.org/conda-forge/linux-64/brunsli-0.1-h9c3ff4c_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/cachetools-5.0.0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/cfitsio-4.1.0-hd9d235c_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/charset-normalizer-2.0.12-pyhd8ed1ab_0.tar.bz2 -https://conda.anaconda.org/conda-forge/noarch/cloudpickle-2.0.0-pyhd8ed1ab_0.tar.bz2 +https://conda.anaconda.org/conda-forge/noarch/cloudpickle-2.1.0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/colorama-0.4.4-pyh9f0ad1d_0.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/curl-7.83.0-h7bff187_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/curl-7.83.1-h7bff187_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/cycler-0.11.0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/dataclasses-0.8-pyhc8e2a94_3.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/decorator-5.1.1-pyhd8ed1ab_0.tar.bz2 @@ -156,7 +169,7 @@ https://conda.anaconda.org/conda-forge/noarch/entrypoints-0.4-pyhd8ed1ab_0.tar.b https://conda.anaconda.org/conda-forge/noarch/executing-0.8.3-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/flit-core-3.7.1-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/fontconfig-2.14.0-h8e229c2_0.tar.bz2 -https://conda.anaconda.org/conda-forge/noarch/fsspec-2022.3.0-pyhd8ed1ab_0.tar.bz2 +https://conda.anaconda.org/conda-forge/noarch/fsspec-2022.5.0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/hdf5-1.12.1-nompi_h2386368_104.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/idna-3.3-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/iniconfig-1.1.1-pyh9f0ad1d_0.tar.bz2 @@ -168,6 +181,7 @@ https://conda.anaconda.org/conda-forge/linux-64/libva-2.14.0-h7f98852_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/locket-1.0.0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/munkres-1.1.4-pyh9f0ad1d_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/nest-asyncio-1.5.5-pyhd8ed1ab_0.tar.bz2 +https://conda.anaconda.org/conda-forge/noarch/networkx-2.8.1-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/pandocfilters-1.5.0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/parso-0.8.3-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/pathspec-0.9.0-pyhd8ed1ab_0.tar.bz2 @@ -182,8 +196,8 @@ https://conda.anaconda.org/conda-forge/noarch/py-1.11.0-pyh6c4a22f_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/pyasn1-0.4.8-py_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/pycparser-2.21-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/pydeprecate-0.3.2-pyhd8ed1ab_0.tar.bz2 -https://conda.anaconda.org/conda-forge/noarch/pyjwt-2.3.0-pyhd8ed1ab_1.tar.bz2 -https://conda.anaconda.org/conda-forge/noarch/pyparsing-3.0.8-pyhd8ed1ab_0.tar.bz2 +https://conda.anaconda.org/conda-forge/noarch/pyjwt-2.4.0-pyhd8ed1ab_0.tar.bz2 +https://conda.anaconda.org/conda-forge/noarch/pyparsing-3.0.9-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/python-fastjsonschema-2.15.3-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/python_abi-3.9-2_cp39.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/pytz-2022.1-pyhd8ed1ab_0.tar.bz2 @@ -194,7 +208,7 @@ https://conda.anaconda.org/conda-forge/noarch/tensorboard-plugin-wit-1.8.1-pyhd8 https://conda.anaconda.org/conda-forge/noarch/threadpoolctl-3.1.0-pyh8a188c0_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/tomli-2.0.1-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/toolz-0.11.2-pyhd8ed1ab_0.tar.bz2 -https://conda.anaconda.org/conda-forge/noarch/traitlets-5.1.1-pyhd8ed1ab_0.tar.bz2 +https://conda.anaconda.org/conda-forge/noarch/traitlets-5.2.1.post0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/typing_extensions-4.2.0-pyha770c72_1.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/webencodings-0.5.1-py_1.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/websocket-client-1.3.2-pyhd8ed1ab_0.tar.bz2 @@ -206,7 +220,7 @@ https://conda.anaconda.org/conda-forge/noarch/asttokens-2.0.5-pyhd8ed1ab_0.tar.b https://conda.anaconda.org/conda-forge/noarch/babel-2.10.1-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/beautifulsoup4-4.11.1-pyha770c72_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/cairo-1.16.0-ha12eb4b_1010.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/certifi-2021.10.8-py39hf3d152e_2.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/certifi-2022.5.18.1-py39hf3d152e_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/cffi-1.15.0-py39h4bc2ebd_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/click-8.1.3-py39hf3d152e_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/cytoolz-0.11.2-py39hb9d737c_2.tar.bz2 @@ -217,9 +231,9 @@ https://conda.anaconda.org/conda-forge/linux-64/frozenlist-1.3.0-py39hb9d737c_1. https://conda.anaconda.org/conda-forge/linux-64/future-0.18.2-py39hf3d152e_5.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/geotiff-1.7.1-h509b78c_1.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/importlib-metadata-4.11.3-py39hf3d152e_1.tar.bz2 -https://conda.anaconda.org/conda-forge/noarch/importlib_resources-5.7.1-pyhd8ed1ab_0.tar.bz2 +https://conda.anaconda.org/conda-forge/noarch/importlib_resources-5.7.1-pyhd8ed1ab_1.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/jedi-0.18.1-py39hf3d152e_1.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/jupyter_core-4.9.2-py39hf3d152e_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/jupyter_core-4.10.0-py39hf3d152e_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/kealib-1.4.14-h87e4c3c_3.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/kiwisolver-1.4.2-py39hf939315_1.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libdap4-3.20.6-hd7c4107_2.tar.bz2 @@ -235,7 +249,7 @@ https://conda.anaconda.org/conda-forge/linux-64/numpy-1.22.3-py39hc58783e_2.tar. https://conda.anaconda.org/conda-forge/noarch/packaging-21.3-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/partd-1.2.0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/pexpect-4.8.0-pyh9f0ad1d_2.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/pillow-9.1.0-py39hae2aec6_2.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/pillow-9.1.1-py39hae2aec6_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/pluggy-1.0.0-py39hf3d152e_3.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/psutil-5.9.0-py39hb9d737c_1.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/pyasn1-modules-0.2.7-py_0.tar.bz2 @@ -244,13 +258,13 @@ https://conda.anaconda.org/conda-forge/linux-64/pysocks-1.7.1-py39hf3d152e_5.tar https://conda.anaconda.org/conda-forge/noarch/python-dateutil-2.8.2-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/pyu2f-0.1.5-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/pyyaml-6.0-py39hb9d737c_4.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/pyzmq-22.3.0-py39headdf64_2.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/pyzmq-23.0.0-py39headdf64_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/rsa-4.8-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/rtree-1.0.0-py39hb102c33_1.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/setuptools-59.5.0-py39hf3d152e_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/sniffio-1.2.0-py39hf3d152e_3.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/tensorboard-data-server-0.6.0-py39hd97740a_2.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/tiledb-2.8.2-h1e4a385_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/tiledb-2.8.3-h1e4a385_1.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/tinycss2-1.1.1-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/tornado-6.1-py39hb9d737c_3.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/tqdm-4.64.0-pyhd8ed1ab_0.tar.bz2 @@ -258,7 +272,7 @@ https://conda.anaconda.org/conda-forge/linux-64/typed-ast-1.5.3-py39hb9d737c_0.t https://conda.anaconda.org/conda-forge/noarch/typing-extensions-4.2.0-hd8ed1ab_1.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/unicodedata2-14.0.0-py39hb9d737c_1.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/aiosignal-1.2.0-pyhd8ed1ab_0.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/anyio-3.5.0-py39hf3d152e_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/anyio-3.6.1-py39hf3d152e_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/argon2-cffi-bindings-21.2.0-py39hb9d737c_2.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/async-timeout-4.0.2-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/backports.functools_lru_cache-1.6.4-pyhd8ed1ab_0.tar.bz2 @@ -269,26 +283,26 @@ https://conda.anaconda.org/conda-forge/linux-64/brotlipy-0.7.0-py39hb9d737c_1004 https://conda.anaconda.org/conda-forge/linux-64/cftime-1.6.0-py39hd257fcd_1.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/click-plugins-1.1.1-py_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/cligj-0.7.2-pyhd8ed1ab_1.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/cryptography-36.0.2-py39hd97740a_1.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/cryptography-37.0.2-py39hd97740a_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/cupy-10.4.0-py39hc3c280e_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/dask-core-2022.5.0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/einops-0.4.1-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/fonttools-4.33.3-py39hb9d737c_0.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/grpcio-1.45.0-py39h0f497a6_0.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/imagecodecs-2022.2.22-py39h9c0c3a3_4.tar.bz2 -https://conda.anaconda.org/conda-forge/noarch/imageio-2.19.0-pyhcf75d05_1.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/grpcio-1.46.1-py39h0f497a6_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/imagecodecs-2022.2.22-py39h9c0c3a3_5.tar.bz2 +https://conda.anaconda.org/conda-forge/noarch/imageio-2.19.2-pyhcf75d05_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/importlib_metadata-4.11.3-hd8ed1ab_1.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/jinja2-3.1.2-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/joblib-1.1.0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/jsonschema-4.5.1-pyhd8ed1ab_0.tar.bz2 -https://conda.anaconda.org/conda-forge/noarch/jupyter_client-7.3.0-pyhd8ed1ab_0.tar.bz2 +https://conda.anaconda.org/conda-forge/noarch/jupyter_client-7.3.1-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/markdown-3.3.7-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/munch-2.5.0-py_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/omegaconf-2.1.2-py39hf3d152e_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/pandas-1.4.2-py39h1832856_1.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/pip-22.0.3-pyhd8ed1ab_0.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/poppler-22.01.0-h1434ded_2.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/protobuf-3.20.0-py39h5a03fae_4.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/poppler-22.04.0-h1434ded_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/protobuf-3.20.1-py39h5a03fae_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/pygments-2.12.0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/pyproj-3.3.1-py39hcadae2f_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/pytest-7.0.1-py39hf3d152e_0.tar.bz2 @@ -297,41 +311,40 @@ https://conda.anaconda.org/conda-forge/linux-64/scipy-1.8.0-py39hee8e79c_1.tar.b https://conda.anaconda.org/conda-forge/linux-64/shapely-1.8.2-py39h73b9895_1.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/snuggs-1.4.7-py_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/stack_data-0.2.0-pyhd8ed1ab_0.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/terminado-0.13.3-py39hf3d152e_1.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/terminado-0.15.0-py39hf3d152e_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/yarl-1.7.2-py39hb9d737c_2.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/aiohttp-3.8.1-py39hb9d737c_1.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/argon2-cffi-21.3.0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/blas-2.114-mkl.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/geopandas-base-0.10.2-pyha770c72_1.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/jupyterlab_pygments-0.2.2-pyhd8ed1ab_0.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/libgdal-3.4.2-hb785293_6.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/libgdal-3.4.3-h56144a5_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/matplotlib-base-3.5.2-py39h700656a_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/nbformat-5.4.0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/netcdf4-1.5.8-nompi_py39h64b754b_101.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/oauthlib-3.2.0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/pyopenssl-22.0.0-pyhd8ed1ab_0.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/scikit-learn-1.0.2-py39h4dfa638_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/scikit-learn-1.1.1-py39h4037b75_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/tifffile-2022.5.4-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/wcwidth-0.2.5-pyh9f0ad1d_2.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/xarray-2022.3.0-pyhd8ed1ab_0.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/gdal-3.4.2-py39hc691d54_6.tar.bz2 -https://conda.anaconda.org/conda-forge/noarch/nbclient-0.6.2-pyhd8ed1ab_0.tar.bz2 -https://conda.anaconda.org/conda-forge/noarch/networkx-2.8-pyhd8ed1ab_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/gdal-3.4.3-py39hc691d54_0.tar.bz2 +https://conda.anaconda.org/conda-forge/noarch/nbclient-0.6.3-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/prompt-toolkit-3.0.29-pyha770c72_0.tar.bz2 https://conda.anaconda.org/pytorch/linux-64/pytorch-1.11.0-py3.9_cuda11.3_cudnn8.2.0_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/rasterio-1.2.10-py39h2e4b6e6_5.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/scikit-image-0.19.2-py39hde0f152_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/urllib3-1.26.9-pyhd8ed1ab_0.tar.bz2 +https://conda.anaconda.org/rapidsai/linux-64/cucim-22.02.00-cuda_11_py39_g29bfe6f_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/efficientnet-pytorch-0.6.3-pyh9f0ad1d_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/fiona-1.8.21-py39h83acdc4_1.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/gmt-6.3.0-h793420d_4.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/ipython-8.3.0-py39hf3d152e_0.tar.bz2 -https://conda.anaconda.org/conda-forge/noarch/kornia-0.6.4-pyhd8ed1ab_0.tar.bz2 +https://conda.anaconda.org/conda-forge/noarch/kornia-0.6.5-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/nbconvert-core-6.5.0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/requests-2.27.1-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/rioxarray-0.10.1-pyhd8ed1ab_0.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/scikit-image-0.19.2-py39hde0f152_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/torchmetrics-0.8.2-pyhd8ed1ab_0.tar.bz2 -https://conda.anaconda.org/rapidsai/linux-64/cucim-22.02.00-cuda_11_py39_g29bfe6f_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/google-auth-2.6.6-pyh6c4a22f_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/ipykernel-6.13.0-py39hef51801_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/jupyter_server-1.17.0-pyhd8ed1ab_0.tar.bz2 @@ -340,7 +353,7 @@ https://conda.anaconda.org/conda-forge/noarch/pygmt-0.5.0-pyhd8ed1ab_1.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/requests-oauthlib-1.3.1-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/pytorch/linux-64/torchvision-0.12.0-py39_cu113.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/google-auth-oauthlib-0.4.6-pyhd8ed1ab_0.tar.bz2 -https://conda.anaconda.org/conda-forge/noarch/jupyterlab_server-2.13.0-pyhd8ed1ab_1.tar.bz2 +https://conda.anaconda.org/conda-forge/noarch/jupyterlab_server-2.14.0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/nbconvert-6.5.0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/notebook-shim-0.1.0-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/pretrainedmodels-0.7.4-pyhd8ed1ab_2.tar.bz2 diff --git a/environment.yml b/environment.yml index 8b870fb..9b0ea0b 100644 --- a/environment.yml +++ b/environment.yml @@ -2,11 +2,13 @@ name: s2s2net channels: - conda-forge - rapidsai + - nodefaults dependencies: - conda-forge::black=22.3.0 - rapidsai::cucim=22.02.00 - conda-forge::cudatoolkit=11.3.1 - conda-forge::geopandas-base=0.10.2 + - conda-forge::gxx_linux-64=11.2.0 - conda-forge::jupyterlab=3.3.2 - conda-forge::pip=22.0.3 - conda-forge::pygmt=0.5.0 @@ -17,5 +19,6 @@ dependencies: - conda-forge::rioxarray=0.10.1 - conda-forge::torchgeo=0.2.0 - pip: + - deepspeed==0.6.4 - https://download.openmmlab.com/mmcv/dist/cu113/torch1.11.0/mmcv_full-1.4.8-cp39-cp39-manylinux1_x86_64.whl - mmsegmentation==0.21.1 diff --git a/s2s2net/model.py b/s2s2net/model.py index 7ae4900..0768e30 100644 --- a/s2s2net/model.py +++ b/s2s2net/model.py @@ -196,7 +196,8 @@ def evaluate( - iou (Intersection over Union) - f1 (F1 score) """ - x: torch.Tensor = batch["image"].float() # Input Sentinel-2 image + dtype = torch.float16 if self.precision == 16 else torch.float + x: torch.Tensor = batch["image"].to(dtype=dtype) # Input Sentinel-2 image y: torch.Tensor = batch["mask"] # Groundtruth binary mask y_highres: torch.Tensor = batch["hres"] # High resolution image # y = torch.randn(8, 1, 2560, 2560) @@ -627,8 +628,8 @@ def cli_main(): trainer: pl.Trainer = pl.Trainer( # deterministic=True, accelerator="auto", - devices=2, - strategy="ddp_find_unused_parameters_false", + devices="auto", + strategy="deepspeed_stage_2", logger=tensorboard_logger, max_epochs=27, precision=16,