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This repository contains all of the scripts, data and figures for the rate_variability_variation paper. data/ Contains the data on all of the proteins in the study figures/ Figures manuscript/ The manuscript pdb_maps/ Contains the maps that map the sequence of the virus structures to the corresponding alignment scripts/ Contains all of the analysis scripts viral_alignments/ Contains the virus alignments from Sharamoradi et al. (2014) readme_naming_conventions.txt A file that contains information on the virus proteins from Sharamoradi et al. (2014)