Notebook of scRNA-seq analysis from cells collected from the mouse oviduct.
Adult (8-12 weeks old) C57B6/J mice were ovariectomized (OVX) and treated with either vehicle (V) or estrogen (E) for 2 hours (n=4 mice/treatment/group). The oviducts were dissected into infundibulum + ampulla (AmpIsth) or isthmus + uterine-tubal junction (IsthUTJ) before single cell isolation.
conda env create -n winuthayanon-lab -f winuthayanon-lab.yml conda activate winuthayanon-lab
python -m ipykernel install --user --name winuthayanon-lab --display-name "winuthayanon-lab"
jupyter kernelspec list jupyter kernelspec remove -f winuthayanon-lab
conda env list conda remove --name winuthayanon-lab --all
conda env export -n winuthayanon-lab -f winuthayanon-lab.yml