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Virtual machine for Workflow4Metabolomics Galaxy platform.
xcms for Galaxy
Correction for signal drift and batch effects
Discovery of significant signatures from omics data
CAMERA for Galaxy
Shiny Server Galaxy Interactive Environment
Univariate parametric and non-parametric hypothesis testing with correction for multiple testing
Metrics and graphics to check the quality of the data
Galaxy Interactive Environment to display TIC and BPC chromatograms.
Galaxy Interactive Environment to display heatmap.
Galaxy Interactive Environment to display Principal Components Analysis.
PCA, PLS(-DA), and OPLS(-DA)
Galaxy tools for msPurity package: includes precursor ion purity calculations and spectral matching
This repository contains the W4M tool list
IPO for Galaxy
Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
Workflow4Metabolomics meta repository
A couple of small wrapper functions around gie_helpers for use in interactive R sessions
ASICS-based annotation for 1H-NMR spectrum
Anova for Galaxy
Helper scripts to work with Galaxy's Interactive Environments
Processing GC-MS data with metaMS in Galaxy