snp_index

input file: chr3_emaize.genoMat, merbin_infw.txt (with the first row removed)

g++ -O3 bin.c -o bin

g++ -O3 preproc.cpp -o preproc

./bin

./preproc

Name		Name	Last commit message	Last commit date
Latest commit History 58 Commits
README.md		README.md
bin.c		bin.c
brr.py		brr.py
brr_val.py		brr_val.py
brr_val2.py		brr_val2.py
corr.py		corr.py
lars.py		lars.py
lmm.py		lmm.py
merbin_infw.txt		merbin_infw.txt
mix3.py		mix3.py
parents.txt		parents.txt
pheno		pheno
preproc.cpp		preproc.cpp
rr.py		rr.py
snp_index.bz2		snp_index.bz2
split_idx.py		split_idx.py
summary.cpp		summary.cpp
summary.py		summary.py
summary_new.cpp		summary_new.cpp
summary_python2.py		summary_python2.py
weight.py		weight.py
weighted2.pdf		weighted2.pdf
xgb.py		xgb.py
xgb2s.py		xgb2s.py
xgb2s_python3.py		xgb2s_python3.py

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