1.0.9 (important)

@yeban yeban released this Nov 19, 2016 · 306 commits to master since this release

  • Fixes misleading prettification of evalue in hits table.
  • Evalue 0.00 was shown as 0.00x10+00 in hsp stats table. Fix that.

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1.0.8

@yeban yeban released this Mar 18, 2016 · 306 commits to master since this release

Bug fixes:

  • Sidebar bug (#176)
  • xdg-open nuisance (#195)

Improves:

  • Apache integration

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1.0.7

@yeban yeban released this Feb 5, 2016 · 306 commits to master since this release

Update please cite line shown on quit to our biorxiv pre-print.

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1.0.6

@yeban yeban released this Dec 30, 2015 · 306 commits to master since this release

Updates please cite line in the footer to our biorxiv preprint.

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1.0.5

@yeban yeban released this Nov 6, 2015 · 306 commits to master since this release

  • Fixes issues on Ruby 1.8.7
    • Can’t convert Hash into String error.
    • Installation issues due to JSON gem.
  • Get back to open sans font.

Primarily this release is for those who were unable to use SequenceServer on Ruby 1.8.7. For others, upgrade if you want the new font.

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1.0.4

@yeban yeban released this May 18, 2015 · 308 commits to master since this release

Fixes

  • Drag and drop.
  • Error scanning database (regression).

Refinements

  • Sort hits by score if evalue is the same.
  • Sort hit links by title if by chance order is the same.

Features

  • Include length in tabular summary.
  • Provide means to get taxonomy data in full tabular report.
  • Generate links to UniProt page if hit is from UniProt database.

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1.0.3 (critical)

@yeban yeban released this May 12, 2015 · 322 commits to master since this release

  • Resolves a critical evalue rounding of bug which caused evalue of 0.001 to be displayed as 0.00 which is very misleading. Thanks to Markus Schroder and Dr. Yannick Wurm for reporting the bug.
  • Makes it possible to use SequenceServer in an iframe by default. The behaviour is configurable by setting "frame_options" to "deny" or "sameorigin" or "ALLOW-FROM url" in config file.
  • Improves the debug output for the "database scanning" error that has affected some of our users. This should help us debug the issue better.

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1.0.2

@yeban yeban released this Mar 23, 2015 · 331 commits to master since this release

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1.0.1

@yeban yeban released this Mar 11, 2015 · 339 commits to master since this release

  • Show version number in the top header bar (thanks to Dr. Wolfgang Rumpf for the suggestion).

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1.0.0

@yeban yeban released this Mar 11, 2015 · 344 commits to master since this release

Assistive setup, new UI, drag n drop, graphical overview, add custom links to hits (e.g., jbrowse), bulk-download FASTA of hits (upto 30 hits at a time), XML and TSV download.

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