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v0.2.0
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@wwood wwood released this 31 Aug 23:25
v0.2.0
8213d34
  • Overall full help for cluster mode, add man as a dependency.
  • Aligned fraction is calculated by galah from fragment counts, rather than relying on FastANI's thresholds. See #7 and ParBLiSS/FastANI#70
  • Update FastANI dependency version to 1.31 (#6)
  • Add further output options e.g. --output-representative-fasta-directory-copy and --output-representative-list. (#3)
  • Add ability to change quality formula with --quality-formula, and default to Parks2020_reduced.
  • Rename the --prethreshold-ani argument to be --precluster-ani.

Thanks to Antônio Pedro Camargo (@apcamargo ) for help on a few of these issues.

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