From b46809854475028c988db1b7c9b7db7220f21f4c Mon Sep 17 00:00:00 2001 From: Dan Kuester Date: Wed, 23 Oct 2024 12:10:30 -0600 Subject: [PATCH 1/9] initial commit --- xarray_dataclasses/dataarray.py | 232 +++++++++++++++------------- xarray_dataclasses/datamodel.py | 17 ++- xarray_dataclasses/dataset.py | 258 +++++++++++++++++--------------- xarray_dataclasses/typing.py | 14 +- xarray_dataclasses/util.py | 27 ++++ 5 files changed, 311 insertions(+), 237 deletions(-) create mode 100644 xarray_dataclasses/util.py diff --git a/xarray_dataclasses/dataarray.py b/xarray_dataclasses/dataarray.py index aaed391..33182a6 100644 --- a/xarray_dataclasses/dataarray.py +++ b/xarray_dataclasses/dataarray.py @@ -7,12 +7,10 @@ from functools import partial from inspect import signature from types import MethodType -from typing import Any, Callable, Optional, Protocol, Type, TypeVar, Union, overload +from typing import Any, Callable, Optional, Protocol, TYPE_CHECKING, Type, TypeVar, Union, overload # dependencies -import numpy as np -import xarray as xr from typing_extensions import ParamSpec @@ -20,11 +18,23 @@ from .datamodel import DataModel from .dataoptions import DataOptions from .typing import AnyArray, AnyXarray, DataClass, Order, Shape, Sizes +from .util import lazy_import +# lazy imports of large modules +if TYPE_CHECKING: + import numpy as np + import xarray as xr +else: + np = lazy_import('xarray') + xr = lazy_import('xarray') -# type hints +# private type hints PInit = ParamSpec("PInit") -TDataArray = TypeVar("TDataArray", bound=xr.DataArray) + +if TYPE_CHECKING: + TDataArray = TypeVar("TDataArray", bound=xr.DataArray) +else: + TDataArray = TypeVar("TDataArray", bound='xr.DataArray') class OptionedClass(DataClass[PInit], Protocol[PInit, TDataArray]): @@ -33,29 +43,30 @@ class OptionedClass(DataClass[PInit], Protocol[PInit, TDataArray]): __dataoptions__: DataOptions[TDataArray] -# runtime functions -@overload -def asdataarray( - dataclass: OptionedClass[PInit, TDataArray], - reference: Optional[AnyXarray] = None, - dataoptions: None = None, -) -> TDataArray: ... +if TYPE_CHECKING: + # runtime functions + @overload + def asdataarray( + dataclass: OptionedClass[PInit, TDataArray], + reference: Optional[AnyXarray] = None, + dataoptions: None = None, + ) -> xr.DataArray: ... -@overload -def asdataarray( - dataclass: DataClass[PInit], - reference: Optional[AnyXarray] = None, - dataoptions: None = None, -) -> xr.DataArray: ... + @overload + def asdataarray( + dataclass: DataClass[PInit], + reference: Optional[AnyXarray] = None, + dataoptions: None = None, + ) -> xr.DataArray: ... -@overload -def asdataarray( - dataclass: Any, - reference: Optional[AnyXarray] = None, - dataoptions: DataOptions[TDataArray] = DataOptions(xr.DataArray), -) -> TDataArray: ... + @overload + def asdataarray( + dataclass: Any, + reference: Optional[AnyXarray] = None, + dataoptions: DataOptions[TDataArray] = DataOptions(xr.DataArray), + ) -> xr.DataArray: ... def asdataarray( @@ -112,19 +123,20 @@ class classproperty: def __init__(self, func: Any) -> None: self.__func__ = func - @overload - def __get__( - self, - obj: Any, - cls: Type[OptionedClass[PInit, TDataArray]], - ) -> Callable[PInit, TDataArray]: ... - - @overload - def __get__( - self, - obj: Any, - cls: Type[DataClass[PInit]], - ) -> Callable[PInit, xr.DataArray]: ... + if TYPE_CHECKING: + @overload + def __get__( + self, + obj: Any, + cls: Type[OptionedClass[PInit, TDataArray]], + ) -> Callable[PInit, TDataArray]: ... + + @overload + def __get__( + self, + obj: Any, + cls: Type[DataClass[PInit]], + ) -> Callable[PInit, xr.DataArray]: ... def __get__(self, obj: Any, cls: Any) -> Any: return self.__func__(cls) @@ -163,7 +175,7 @@ def shaped( func: Callable[[Shape], AnyArray], shape: Union[Shape, Sizes], **kwargs: Any, - ) -> xr.DataArray: ... + ) -> TDataArray: ... @classmethod def shaped( @@ -191,23 +203,24 @@ def shaped( return asdataarray(cls(**{key: func(shape)}, **kwargs)) - @overload - @classmethod - def empty( - cls: Type[OptionedClass[PInit, TDataArray]], - shape: Union[Shape, Sizes], - order: Order = "C", - **kwargs: Any, - ) -> TDataArray: ... - - @overload - @classmethod - def empty( - cls: Type[DataClass[PInit]], - shape: Union[Shape, Sizes], - order: Order = "C", - **kwargs: Any, - ) -> xr.DataArray: ... + if TYPE_CHECKING: + @overload + @classmethod + def empty( + cls: Type[OptionedClass[PInit, TDataArray]], + shape: Union[Shape, Sizes], + order: Order = "C", + **kwargs: Any, + ) -> TDataArray: ... + + @overload + @classmethod + def empty( + cls: Type[DataClass[PInit]], + shape: Union[Shape, Sizes], + order: Order = "C", + **kwargs: Any, + ) -> xr.DataArray: ... @classmethod def empty( @@ -231,23 +244,24 @@ def empty( func = partial(np.empty, order=order) return cls.shaped(func, shape, **kwargs) - @overload - @classmethod - def zeros( - cls: Type[OptionedClass[PInit, TDataArray]], - shape: Union[Shape, Sizes], - order: Order = "C", - **kwargs: Any, - ) -> TDataArray: ... - - @overload - @classmethod - def zeros( - cls: Type[DataClass[PInit]], - shape: Union[Shape, Sizes], - order: Order = "C", - **kwargs: Any, - ) -> xr.DataArray: ... + if TYPE_CHECKING: + @overload + @classmethod + def zeros( + cls: Type[OptionedClass[PInit, TDataArray]], + shape: Union[Shape, Sizes], + order: Order = "C", + **kwargs: Any, + ) -> TDataArray: ... + + @overload + @classmethod + def zeros( + cls: Type[DataClass[PInit]], + shape: Union[Shape, Sizes], + order: Order = "C", + **kwargs: Any, + ) -> xr.DataArray: ... @classmethod def zeros( @@ -271,23 +285,24 @@ def zeros( func = partial(np.zeros, order=order) return cls.shaped(func, shape, **kwargs) - @overload - @classmethod - def ones( - cls: Type[OptionedClass[PInit, TDataArray]], - shape: Union[Shape, Sizes], - order: Order = "C", - **kwargs: Any, - ) -> TDataArray: ... - - @overload - @classmethod - def ones( - cls: Type[DataClass[PInit]], - shape: Union[Shape, Sizes], - order: Order = "C", - **kwargs: Any, - ) -> xr.DataArray: ... + if TYPE_CHECKING: + @overload + @classmethod + def ones( + cls: Type[OptionedClass[PInit, TDataArray]], + shape: Union[Shape, Sizes], + order: Order = "C", + **kwargs: Any, + ) -> TDataArray: ... + + @overload + @classmethod + def ones( + cls: Type[DataClass[PInit]], + shape: Union[Shape, Sizes], + order: Order = "C", + **kwargs: Any, + ) -> xr.DataArray: ... @classmethod def ones( @@ -311,25 +326,26 @@ def ones( func = partial(np.ones, order=order) return cls.shaped(func, shape, **kwargs) - @overload - @classmethod - def full( - cls: Type[OptionedClass[PInit, TDataArray]], - shape: Union[Shape, Sizes], - fill_value: Any, - order: Order = "C", - **kwargs: Any, - ) -> TDataArray: ... - - @overload - @classmethod - def full( - cls: Type[DataClass[PInit]], - shape: Union[Shape, Sizes], - fill_value: Any, - order: Order = "C", - **kwargs: Any, - ) -> xr.DataArray: ... + if TYPE_CHECKING: + @overload + @classmethod + def full( + cls: Type[OptionedClass[PInit, TDataArray]], + shape: Union[Shape, Sizes], + fill_value: Any, + order: Order = "C", + **kwargs: Any, + ) -> TDataArray: ... + + @overload + @classmethod + def full( + cls: Type[DataClass[PInit]], + shape: Union[Shape, Sizes], + fill_value: Any, + order: Order = "C", + **kwargs: Any, + ) -> xr.DataArray: ... @classmethod def full( diff --git a/xarray_dataclasses/datamodel.py b/xarray_dataclasses/datamodel.py index 81a8551..03e89ab 100644 --- a/xarray_dataclasses/datamodel.py +++ b/xarray_dataclasses/datamodel.py @@ -13,15 +13,15 @@ Literal, Optional, Tuple, + TYPE_CHECKING, Type, + TypeVar, Union, cast, ) # dependencies -import numpy as np -import xarray as xr from typing_extensions import ParamSpec, get_type_hints @@ -40,7 +40,15 @@ get_name, get_role, ) +from .util import lazy_import +# lazy imports of large modules +if TYPE_CHECKING: + import numpy as np + import xarray as xr +else: + numpy = lazy_import('xarray') + xr = lazy_import('xarray') # type hints PInit = ParamSpec("PInit") @@ -133,7 +141,8 @@ def __post_init__(self) -> None: if model.names: setattr(self, "name", model.names[0].value) - def __call__(self, reference: Optional[AnyXarray] = None) -> xr.DataArray: + + def __call__(self, reference: Optional[AnyXarray] = None) -> 'xr.DataArray': """Create a DataArray object according to the entry.""" from .dataarray import asdataarray @@ -255,7 +264,7 @@ def get_typedarray( dims: Dims, dtype: Optional[AnyDType], reference: Optional[AnyXarray] = None, -) -> xr.DataArray: +) -> 'xr.DataArray': """Create a DataArray object with given dims and dtype. Args: diff --git a/xarray_dataclasses/dataset.py b/xarray_dataclasses/dataset.py index 9f4bd2f..ecc70ab 100644 --- a/xarray_dataclasses/dataset.py +++ b/xarray_dataclasses/dataset.py @@ -7,12 +7,10 @@ from functools import partial from inspect import signature from types import MethodType -from typing import Any, Callable, Dict, Optional, Protocol, Type, TypeVar, overload +from typing import Any, Callable, Dict, Optional, Protocol, Type, TYPE_CHECKING, TypeVar, overload # dependencies -import numpy as np -import xarray as xr from typing_extensions import ParamSpec @@ -20,11 +18,20 @@ from .datamodel import DataModel from .dataoptions import DataOptions from .typing import AnyArray, AnyXarray, DataClass, Order, Shape, Sizes +from .util import lazy_import + +# lazy imports of large modules +if TYPE_CHECKING: + import numpy as np + import xarray as xr +else: + numpy = lazy_import('xarray') + xr = lazy_import('xarray') # type hints PInit = ParamSpec("PInit") -TDataset = TypeVar("TDataset", bound=xr.Dataset) +TDataset = TypeVar("TDataset", bound='xr.Dataset') class OptionedClass(DataClass[PInit], Protocol[PInit, TDataset]): @@ -34,28 +41,29 @@ class OptionedClass(DataClass[PInit], Protocol[PInit, TDataset]): # runtime functions and classes -@overload -def asdataset( - dataclass: OptionedClass[PInit, TDataset], - reference: Optional[AnyXarray] = None, - dataoptions: None = None, -) -> TDataset: ... +if TYPE_CHECKING: + @overload + def asdataset( + dataclass: OptionedClass[PInit, TDataset], + reference: Optional[AnyXarray] = None, + dataoptions: None = None, + ) -> TDataset: ... -@overload -def asdataset( - dataclass: DataClass[PInit], - reference: Optional[AnyXarray] = None, - dataoptions: None = None, -) -> xr.Dataset: ... + @overload + def asdataset( + dataclass: DataClass[PInit], + reference: Optional[AnyXarray] = None, + dataoptions: None = None, + ) -> xr.Dataset: ... -@overload -def asdataset( - dataclass: Any, - reference: Optional[AnyXarray] = None, - dataoptions: DataOptions[TDataset] = DataOptions(xr.Dataset), -) -> TDataset: ... + @overload + def asdataset( + dataclass: Any, + reference: Optional[AnyXarray] = None, + dataoptions: DataOptions[TDataset] = DataOptions(xr.Dataset), + ) -> TDataset: ... def asdataset( @@ -112,19 +120,20 @@ class classproperty: def __init__(self, func: Callable[..., Any]) -> None: self.__func__ = func - @overload - def __get__( - self, - obj: Any, - cls: Type[OptionedClass[PInit, TDataset]], - ) -> Callable[PInit, TDataset]: ... - - @overload - def __get__( - self, - obj: Any, - cls: Type[DataClass[PInit]], - ) -> Callable[PInit, xr.Dataset]: ... + if TYPE_CHECKING: + @overload + def __get__( + self, + obj: Any, + cls: Type[OptionedClass[PInit, TDataset]], + ) -> Callable[PInit, TDataset]: ... + + @overload + def __get__( + self, + obj: Any, + cls: Type[DataClass[PInit]], + ) -> Callable[PInit, xr.Dataset]: ... def __get__(self, obj: Any, cls: Any) -> Any: return self.__func__(cls) @@ -147,23 +156,24 @@ def new(cls: Any, *args: Any, **kwargs: Any) -> Any: setattr(new, "__signature__", sig) return MethodType(new, cls) - @overload - @classmethod - def shaped( - cls: Type[OptionedClass[PInit, TDataset]], - func: Callable[[Shape], AnyArray], - sizes: Sizes, - **kwargs: Any, - ) -> TDataset: ... - - @overload - @classmethod - def shaped( - cls: Type[DataClass[PInit]], - func: Callable[[Shape], AnyArray], - sizes: Sizes, - **kwargs: Any, - ) -> xr.Dataset: ... + if TYPE_CHECKING: + @overload + @classmethod + def shaped( + cls: Type[OptionedClass[PInit, TDataset]], + func: Callable[[Shape], AnyArray], + sizes: Sizes, + **kwargs: Any, + ) -> TDataset: ... + + @overload + @classmethod + def shaped( + cls: Type[DataClass[PInit]], + func: Callable[[Shape], AnyArray], + sizes: Sizes, + **kwargs: Any, + ) -> xr.Dataset: ... @classmethod def shaped( @@ -192,23 +202,24 @@ def shaped( return asdataset(cls(**data_vars, **kwargs)) - @overload - @classmethod - def empty( - cls: Type[OptionedClass[PInit, TDataset]], - sizes: Sizes, - order: Order = "C", - **kwargs: Any, - ) -> TDataset: ... - - @overload - @classmethod - def empty( - cls: Type[DataClass[PInit]], - sizes: Sizes, - order: Order = "C", - **kwargs: Any, - ) -> xr.Dataset: ... + if TYPE_CHECKING: + @overload + @classmethod + def empty( + cls: Type[OptionedClass[PInit, TDataset]], + sizes: Sizes, + order: Order = "C", + **kwargs: Any, + ) -> TDataset: ... + + @overload + @classmethod + def empty( + cls: Type[DataClass[PInit]], + sizes: Sizes, + order: Order = "C", + **kwargs: Any, + ) -> xr.Dataset: ... @classmethod def empty( @@ -232,23 +243,24 @@ def empty( func = partial(np.empty, order=order) return cls.shaped(func, sizes, **kwargs) - @overload - @classmethod - def zeros( - cls: Type[OptionedClass[PInit, TDataset]], - sizes: Sizes, - order: Order = "C", - **kwargs: Any, - ) -> TDataset: ... - - @overload - @classmethod - def zeros( - cls: Type[DataClass[PInit]], - sizes: Sizes, - order: Order = "C", - **kwargs: Any, - ) -> xr.Dataset: ... + if TYPE_CHECKING: + @overload + @classmethod + def zeros( + cls: Type[OptionedClass[PInit, TDataset]], + sizes: Sizes, + order: Order = "C", + **kwargs: Any, + ) -> TDataset: ... + + @overload + @classmethod + def zeros( + cls: Type[DataClass[PInit]], + sizes: Sizes, + order: Order = "C", + **kwargs: Any, + ) -> xr.Dataset: ... @classmethod def zeros( @@ -272,23 +284,24 @@ def zeros( func = partial(np.zeros, order=order) return cls.shaped(func, sizes, **kwargs) - @overload - @classmethod - def ones( - cls: Type[OptionedClass[PInit, TDataset]], - sizes: Sizes, - order: Order = "C", - **kwargs: Any, - ) -> TDataset: ... - - @overload - @classmethod - def ones( - cls: Type[DataClass[PInit]], - sizes: Sizes, - order: Order = "C", - **kwargs: Any, - ) -> xr.Dataset: ... + if TYPE_CHECKING: + @overload + @classmethod + def ones( + cls: Type[OptionedClass[PInit, TDataset]], + sizes: Sizes, + order: Order = "C", + **kwargs: Any, + ) -> TDataset: ... + + @overload + @classmethod + def ones( + cls: Type[DataClass[PInit]], + sizes: Sizes, + order: Order = "C", + **kwargs: Any, + ) -> xr.Dataset: ... @classmethod def ones( @@ -312,25 +325,26 @@ def ones( func = partial(np.ones, order=order) return cls.shaped(func, sizes, **kwargs) - @overload - @classmethod - def full( - cls: Type[OptionedClass[PInit, TDataset]], - sizes: Sizes, - fill_value: Any, - order: Order = "C", - **kwargs: Any, - ) -> TDataset: ... - - @overload - @classmethod - def full( - cls: Type[DataClass[PInit]], - sizes: Sizes, - fill_value: Any, - order: Order = "C", - **kwargs: Any, - ) -> xr.Dataset: ... + if TYPE_CHECKING: + @overload + @classmethod + def full( + cls: Type[OptionedClass[PInit, TDataset]], + sizes: Sizes, + fill_value: Any, + order: Order = "C", + **kwargs: Any, + ) -> TDataset: ... + + @overload + @classmethod + def full( + cls: Type[DataClass[PInit]], + sizes: Sizes, + fill_value: Any, + order: Order = "C", + **kwargs: Any, + ) -> xr.Dataset: ... @classmethod def full( diff --git a/xarray_dataclasses/typing.py b/xarray_dataclasses/typing.py index 92979f7..25e9977 100644 --- a/xarray_dataclasses/typing.py +++ b/xarray_dataclasses/typing.py @@ -17,7 +17,6 @@ __all__ = ["Attr", "Coord", "Coordof", "Data", "Dataof", "Name"] - # standard library from dataclasses import Field, is_dataclass from enum import Enum @@ -35,6 +34,7 @@ Protocol, Sequence, Tuple, + TYPE_CHECKING, Type, TypeVar, Union, @@ -42,8 +42,6 @@ # dependencies -import numpy as np -import xarray as xr from typing_extensions import ( Annotated, ParamSpec, @@ -53,6 +51,16 @@ get_type_hints, ) +# submodules +from .util import lazy_import + +# lazy imports of large modules +if TYPE_CHECKING: + import numpy as np + import xarray as xr +else: + numpy = lazy_import('xarray') + xr = lazy_import('xarray') # type hints (private) PInit = ParamSpec("PInit") diff --git a/xarray_dataclasses/util.py b/xarray_dataclasses/util.py new file mode 100644 index 0000000..63e4584 --- /dev/null +++ b/xarray_dataclasses/util.py @@ -0,0 +1,27 @@ +import importlib +import importlib.util +import sys + +def lazy_import(module_name: str, package=None): + """postponed import of the module with the specified name. + + The import is not performed until the module is accessed in the code. This + reduces the total time for an initial import by waiting to import the module + until its attributes are accessed. + """ + + # see https://docs.python.org/3/library/importlib.html#implementing-lazy-imports + try: + ret = sys.modules[module_name] + return ret + except KeyError: + pass + + spec = importlib.util.find_spec(module_name, package=package) + if spec is None: + raise ImportError(f'no module found named "{module_name}"') + spec.loader = importlib.util.LazyLoader(spec.loader) + module = importlib.util.module_from_spec(spec) + sys.modules[module_name] = module + spec.loader.exec_module(module) + return module From a041b81a0fd441c4e62c165a1f64f44665966634 Mon Sep 17 00:00:00 2001 From: Dan Kuester Date: Wed, 23 Oct 2024 12:23:53 -0600 Subject: [PATCH 2/9] pass tests --- xarray_dataclasses/dataarray.py | 4 ++-- xarray_dataclasses/datamodel.py | 3 +-- xarray_dataclasses/typing.py | 2 +- xarray_dataclasses/util.py | 4 ++-- 4 files changed, 6 insertions(+), 7 deletions(-) diff --git a/xarray_dataclasses/dataarray.py b/xarray_dataclasses/dataarray.py index 33182a6..1af45d4 100644 --- a/xarray_dataclasses/dataarray.py +++ b/xarray_dataclasses/dataarray.py @@ -25,7 +25,7 @@ import numpy as np import xarray as xr else: - np = lazy_import('xarray') + np = lazy_import('numpy') xr = lazy_import('xarray') # private type hints @@ -175,7 +175,7 @@ def shaped( func: Callable[[Shape], AnyArray], shape: Union[Shape, Sizes], **kwargs: Any, - ) -> TDataArray: ... + ) -> xr.DataArray: ... @classmethod def shaped( diff --git a/xarray_dataclasses/datamodel.py b/xarray_dataclasses/datamodel.py index 03e89ab..0579b33 100644 --- a/xarray_dataclasses/datamodel.py +++ b/xarray_dataclasses/datamodel.py @@ -15,7 +15,6 @@ Tuple, TYPE_CHECKING, Type, - TypeVar, Union, cast, ) @@ -47,7 +46,7 @@ import numpy as np import xarray as xr else: - numpy = lazy_import('xarray') + np = lazy_import('numpy') xr = lazy_import('xarray') # type hints diff --git a/xarray_dataclasses/typing.py b/xarray_dataclasses/typing.py index 25e9977..e365fbe 100644 --- a/xarray_dataclasses/typing.py +++ b/xarray_dataclasses/typing.py @@ -59,7 +59,7 @@ import numpy as np import xarray as xr else: - numpy = lazy_import('xarray') + np = lazy_import('numpy') xr = lazy_import('xarray') # type hints (private) diff --git a/xarray_dataclasses/util.py b/xarray_dataclasses/util.py index 63e4584..38fdefa 100644 --- a/xarray_dataclasses/util.py +++ b/xarray_dataclasses/util.py @@ -2,7 +2,7 @@ import importlib.util import sys -def lazy_import(module_name: str, package=None): +def lazy_import(module_name: str): """postponed import of the module with the specified name. The import is not performed until the module is accessed in the code. This @@ -17,7 +17,7 @@ def lazy_import(module_name: str, package=None): except KeyError: pass - spec = importlib.util.find_spec(module_name, package=package) + spec = importlib.util.find_spec(module_name) if spec is None: raise ImportError(f'no module found named "{module_name}"') spec.loader = importlib.util.LazyLoader(spec.loader) From e7ec99abcea6417c6d4f8c2dd0fb7f703699b0cd Mon Sep 17 00:00:00 2001 From: Dan Kuester Date: Wed, 23 Oct 2024 12:26:44 -0600 Subject: [PATCH 3/9] format changes with black --- xarray_dataclasses/dataarray.py | 25 +++++++++++++++++++------ xarray_dataclasses/datamodel.py | 9 ++++----- xarray_dataclasses/dataset.py | 27 +++++++++++++++++++++------ xarray_dataclasses/typing.py | 4 ++-- xarray_dataclasses/util.py | 1 + 5 files changed, 47 insertions(+), 19 deletions(-) diff --git a/xarray_dataclasses/dataarray.py b/xarray_dataclasses/dataarray.py index 1af45d4..c681109 100644 --- a/xarray_dataclasses/dataarray.py +++ b/xarray_dataclasses/dataarray.py @@ -7,7 +7,17 @@ from functools import partial from inspect import signature from types import MethodType -from typing import Any, Callable, Optional, Protocol, TYPE_CHECKING, Type, TypeVar, Union, overload +from typing import ( + Any, + Callable, + Optional, + Protocol, + TYPE_CHECKING, + Type, + TypeVar, + Union, + overload, +) # dependencies @@ -25,8 +35,8 @@ import numpy as np import xarray as xr else: - np = lazy_import('numpy') - xr = lazy_import('xarray') + np = lazy_import("numpy") + xr = lazy_import("xarray") # private type hints PInit = ParamSpec("PInit") @@ -34,7 +44,7 @@ if TYPE_CHECKING: TDataArray = TypeVar("TDataArray", bound=xr.DataArray) else: - TDataArray = TypeVar("TDataArray", bound='xr.DataArray') + TDataArray = TypeVar("TDataArray", bound="xr.DataArray") class OptionedClass(DataClass[PInit], Protocol[PInit, TDataArray]): @@ -52,7 +62,6 @@ def asdataarray( dataoptions: None = None, ) -> xr.DataArray: ... - @overload def asdataarray( dataclass: DataClass[PInit], @@ -60,7 +69,6 @@ def asdataarray( dataoptions: None = None, ) -> xr.DataArray: ... - @overload def asdataarray( dataclass: Any, @@ -124,6 +132,7 @@ def __init__(self, func: Any) -> None: self.__func__ = func if TYPE_CHECKING: + @overload def __get__( self, @@ -204,6 +213,7 @@ def shaped( return asdataarray(cls(**{key: func(shape)}, **kwargs)) if TYPE_CHECKING: + @overload @classmethod def empty( @@ -245,6 +255,7 @@ def empty( return cls.shaped(func, shape, **kwargs) if TYPE_CHECKING: + @overload @classmethod def zeros( @@ -286,6 +297,7 @@ def zeros( return cls.shaped(func, shape, **kwargs) if TYPE_CHECKING: + @overload @classmethod def ones( @@ -327,6 +339,7 @@ def ones( return cls.shaped(func, shape, **kwargs) if TYPE_CHECKING: + @overload @classmethod def full( diff --git a/xarray_dataclasses/datamodel.py b/xarray_dataclasses/datamodel.py index 0579b33..180e175 100644 --- a/xarray_dataclasses/datamodel.py +++ b/xarray_dataclasses/datamodel.py @@ -46,8 +46,8 @@ import numpy as np import xarray as xr else: - np = lazy_import('numpy') - xr = lazy_import('xarray') + np = lazy_import("numpy") + xr = lazy_import("xarray") # type hints PInit = ParamSpec("PInit") @@ -140,8 +140,7 @@ def __post_init__(self) -> None: if model.names: setattr(self, "name", model.names[0].value) - - def __call__(self, reference: Optional[AnyXarray] = None) -> 'xr.DataArray': + def __call__(self, reference: Optional[AnyXarray] = None) -> "xr.DataArray": """Create a DataArray object according to the entry.""" from .dataarray import asdataarray @@ -263,7 +262,7 @@ def get_typedarray( dims: Dims, dtype: Optional[AnyDType], reference: Optional[AnyXarray] = None, -) -> 'xr.DataArray': +) -> "xr.DataArray": """Create a DataArray object with given dims and dtype. Args: diff --git a/xarray_dataclasses/dataset.py b/xarray_dataclasses/dataset.py index ecc70ab..590faa8 100644 --- a/xarray_dataclasses/dataset.py +++ b/xarray_dataclasses/dataset.py @@ -7,7 +7,17 @@ from functools import partial from inspect import signature from types import MethodType -from typing import Any, Callable, Dict, Optional, Protocol, Type, TYPE_CHECKING, TypeVar, overload +from typing import ( + Any, + Callable, + Dict, + Optional, + Protocol, + Type, + TYPE_CHECKING, + TypeVar, + overload, +) # dependencies @@ -25,13 +35,13 @@ import numpy as np import xarray as xr else: - numpy = lazy_import('xarray') - xr = lazy_import('xarray') + numpy = lazy_import("xarray") + xr = lazy_import("xarray") # type hints PInit = ParamSpec("PInit") -TDataset = TypeVar("TDataset", bound='xr.Dataset') +TDataset = TypeVar("TDataset", bound="xr.Dataset") class OptionedClass(DataClass[PInit], Protocol[PInit, TDataset]): @@ -42,6 +52,7 @@ class OptionedClass(DataClass[PInit], Protocol[PInit, TDataset]): # runtime functions and classes if TYPE_CHECKING: + @overload def asdataset( dataclass: OptionedClass[PInit, TDataset], @@ -49,7 +60,6 @@ def asdataset( dataoptions: None = None, ) -> TDataset: ... - @overload def asdataset( dataclass: DataClass[PInit], @@ -57,7 +67,6 @@ def asdataset( dataoptions: None = None, ) -> xr.Dataset: ... - @overload def asdataset( dataclass: Any, @@ -121,6 +130,7 @@ def __init__(self, func: Callable[..., Any]) -> None: self.__func__ = func if TYPE_CHECKING: + @overload def __get__( self, @@ -157,6 +167,7 @@ def new(cls: Any, *args: Any, **kwargs: Any) -> Any: return MethodType(new, cls) if TYPE_CHECKING: + @overload @classmethod def shaped( @@ -203,6 +214,7 @@ def shaped( return asdataset(cls(**data_vars, **kwargs)) if TYPE_CHECKING: + @overload @classmethod def empty( @@ -244,6 +256,7 @@ def empty( return cls.shaped(func, sizes, **kwargs) if TYPE_CHECKING: + @overload @classmethod def zeros( @@ -285,6 +298,7 @@ def zeros( return cls.shaped(func, sizes, **kwargs) if TYPE_CHECKING: + @overload @classmethod def ones( @@ -326,6 +340,7 @@ def ones( return cls.shaped(func, sizes, **kwargs) if TYPE_CHECKING: + @overload @classmethod def full( diff --git a/xarray_dataclasses/typing.py b/xarray_dataclasses/typing.py index e365fbe..7712f02 100644 --- a/xarray_dataclasses/typing.py +++ b/xarray_dataclasses/typing.py @@ -59,8 +59,8 @@ import numpy as np import xarray as xr else: - np = lazy_import('numpy') - xr = lazy_import('xarray') + np = lazy_import("numpy") + xr = lazy_import("xarray") # type hints (private) PInit = ParamSpec("PInit") diff --git a/xarray_dataclasses/util.py b/xarray_dataclasses/util.py index 38fdefa..bcf48b1 100644 --- a/xarray_dataclasses/util.py +++ b/xarray_dataclasses/util.py @@ -2,6 +2,7 @@ import importlib.util import sys + def lazy_import(module_name: str): """postponed import of the module with the specified name. From dd701e2d625c8cdd3021dc5b54e4fa8af15b4f5f Mon Sep 17 00:00:00 2001 From: Dan Kuester Date: Wed, 23 Oct 2024 12:31:01 -0600 Subject: [PATCH 4/9] more fine tuning --- xarray_dataclasses/dataarray.py | 8 +++----- xarray_dataclasses/util.py | 2 +- 2 files changed, 4 insertions(+), 6 deletions(-) diff --git a/xarray_dataclasses/dataarray.py b/xarray_dataclasses/dataarray.py index c681109..83fe2c0 100644 --- a/xarray_dataclasses/dataarray.py +++ b/xarray_dataclasses/dataarray.py @@ -30,6 +30,7 @@ from .typing import AnyArray, AnyXarray, DataClass, Order, Shape, Sizes from .util import lazy_import + # lazy imports of large modules if TYPE_CHECKING: import numpy as np @@ -38,13 +39,10 @@ np = lazy_import("numpy") xr = lazy_import("xarray") + # private type hints PInit = ParamSpec("PInit") - -if TYPE_CHECKING: - TDataArray = TypeVar("TDataArray", bound=xr.DataArray) -else: - TDataArray = TypeVar("TDataArray", bound="xr.DataArray") +TDataArray = TypeVar("TDataArray", bound="xr.DataArray") class OptionedClass(DataClass[PInit], Protocol[PInit, TDataArray]): diff --git a/xarray_dataclasses/util.py b/xarray_dataclasses/util.py index bcf48b1..8a639dc 100644 --- a/xarray_dataclasses/util.py +++ b/xarray_dataclasses/util.py @@ -21,7 +21,7 @@ def lazy_import(module_name: str): spec = importlib.util.find_spec(module_name) if spec is None: raise ImportError(f'no module found named "{module_name}"') - spec.loader = importlib.util.LazyLoader(spec.loader) + spec.loader = importlib.util.LazyLoader(spec.loader) # type: ignore module = importlib.util.module_from_spec(spec) sys.modules[module_name] = module spec.loader.exec_module(module) From b30de44093ce3ee8c60106dc559ca687ca3ca90d Mon Sep 17 00:00:00 2001 From: Dan Kuester Date: Wed, 23 Oct 2024 12:55:35 -0600 Subject: [PATCH 5/9] fix a missing TYPE_CHECKING guard --- xarray_dataclasses/dataarray.py | 33 +++++++++++++++++---------------- 1 file changed, 17 insertions(+), 16 deletions(-) diff --git a/xarray_dataclasses/dataarray.py b/xarray_dataclasses/dataarray.py index 83fe2c0..e1bce8c 100644 --- a/xarray_dataclasses/dataarray.py +++ b/xarray_dataclasses/dataarray.py @@ -166,23 +166,24 @@ def new(cls: Any, *args: Any, **kwargs: Any) -> Any: setattr(new, "__signature__", sig) return MethodType(new, cls) - @overload - @classmethod - def shaped( - cls: Type[OptionedClass[PInit, TDataArray]], - func: Callable[[Shape], AnyArray], - shape: Union[Shape, Sizes], - **kwargs: Any, - ) -> TDataArray: ... + if TYPE_CHECKING: + @overload + @classmethod + def shaped( + cls: Type[OptionedClass[PInit, TDataArray]], + func: Callable[[Shape], AnyArray], + shape: Union[Shape, Sizes], + **kwargs: Any, + ) -> TDataArray: ... - @overload - @classmethod - def shaped( - cls: Type[DataClass[PInit]], - func: Callable[[Shape], AnyArray], - shape: Union[Shape, Sizes], - **kwargs: Any, - ) -> xr.DataArray: ... + @overload + @classmethod + def shaped( + cls: Type[DataClass[PInit]], + func: Callable[[Shape], AnyArray], + shape: Union[Shape, Sizes], + **kwargs: Any, + ) -> xr.DataArray: ... @classmethod def shaped( From 3e191a1776884934ff90c1392015eb97530d24c0 Mon Sep 17 00:00:00 2001 From: Dan Kuester Date: Fri, 17 Jan 2025 11:46:13 -0700 Subject: [PATCH 6/9] open up xarray dep --- pyproject.toml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pyproject.toml b/pyproject.toml index b6c0b4d..93dce5e 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -19,7 +19,7 @@ numpy = [ typing-extensions = "^4.0" xarray = [ { version = ">=2022.3, <2023.2", python = ">=3.8, <3.9" }, - { version = ">=2022.3, <2025.0", python = ">=3.9, <3.14" }, + { version = ">=2022.3, <2026.0", python = ">=3.9, <3.14" }, ] [tool.poetry.group.dev.dependencies] From 2e0d4b44331d159d175e9ee7a1308b0583b15b63 Mon Sep 17 00:00:00 2001 From: Dan Kuester Date: Fri, 17 Jan 2025 15:55:23 -0700 Subject: [PATCH 7/9] add project field --- pyproject.toml | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/pyproject.toml b/pyproject.toml index 93dce5e..086be33 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,3 +1,7 @@ +[project] +name = "xarray-dataclasses" +version = "1.9.1" + [tool.poetry] name = "xarray-dataclasses" version = "1.9.1" From 14010a6714c1aca410b4c60d5c320d45ec396dcd Mon Sep 17 00:00:00 2001 From: Dan Kuester Date: Wed, 22 Jan 2025 10:10:24 -0700 Subject: [PATCH 8/9] switch to hatchling for a pip compatibility fix --- poetry.lock | 1580 ------------------------------------------------ pyproject.toml | 45 +- 2 files changed, 20 insertions(+), 1605 deletions(-) delete mode 100644 poetry.lock diff --git a/poetry.lock b/poetry.lock deleted file mode 100644 index 3731602..0000000 --- a/poetry.lock +++ /dev/null @@ -1,1580 +0,0 @@ -# This file is automatically @generated by Poetry 1.8.5 and should not be changed by hand. - 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dtype: Optional[AnyDType], # pyright: ignore[reportUnknownParameterType] - reference: Optional[AnyXarray] = None, # pyright: ignore[reportUnknownParameterType] + dtype: Optional[AnyDType], # pyright: ignore[reportUnknownParameterType] + reference: Optional[AnyXarray] = None, # pyright: ignore[reportUnknownParameterType] ) -> "xr.DataArray": """Create a DataArray object with given dims and dtype.