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Hi, I am CPlantBox

Plant Simulations -- 8K resolution

For simulations in https://doi.org/10.1101/810507 please use branch isp

DOI Binder

I can :

  1. Create multiple plant structure
  2. Coupling with PiafMunch, and make carbon and water flow inside of the plant.

Try me 1 click

The most convenient way is to use google colab, which is a Linux virtual machine with jupyter notebook interface. You can click the link to follow the guide there, just to click some buttons and you will be able to create plants here is the link to use it.

or build local

Run CMake which configures the CPlantBox libraries by

cmake . && make

in the root folder, and run some Python tutorial examples (see tutorial/latex/PlantBox_RootSytem), e.g

cd tutorial/examples/python
python3 example1a.py

Folder sructure

/modelparameter Plant parameter files
/src CPlantBox C++ codes
/test Python tests for all CPlantBox classes
/tutorial learn to use CPlantBox

Code documentation

Create the documentation by running doxygen in the folder $ doxygen doxy_config

The documentation will be located in the folder /doc

Examples

Simulation videos availabe in Youtube Channel https://www.youtube.com/channel/UCPK-pFfpK94jiamgwHxX32Q

Plant Simulations -- 8K resolution

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binder app for CPlantBox

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