To reproduce please create a Diagram and change the color of an element. You will notice that at the moment you change the color, the element moves slightly from its initial position. This leads to the user having to reposition the element in its original place.
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Doesn't reproduce on draw.io so it's an integration bug. The workaround for now is to hide the horizontal and vertical ruler from the View > Ruler menu. The shapes are redrawn as if the ruler is not present so they shift with the rule width. I'm looking for a fix.