{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":672581159,"defaultBranch":"main","name":"eliater","ownerLogin":"y0-causal-inference","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-07-30T15:13:23.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/77293448?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1716841451.0","currentOid":""},"activityList":{"items":[{"before":"fe2458c7b0c8ae38af90efb0a04d4e3828d4ada8","after":"113b2856b12a963f4352e54f6b2362137de5c065","ref":"refs/heads/main","pushedAt":"2024-05-27T20:24:11.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"},"commit":{"message":"adding image for motivating example (#29)","shortMessageHtmlLink":"adding image for motivating example (#29)"}},{"before":"a58ba7351181bc517450182324b0d150a814ec90","after":null,"ref":"refs/heads/add-motivating-example-graph","pushedAt":"2024-05-27T20:24:11.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"}},{"before":"fe2458c7b0c8ae38af90efb0a04d4e3828d4ada8","after":"a58ba7351181bc517450182324b0d150a814ec90","ref":"refs/heads/add-motivating-example-graph","pushedAt":"2024-05-27T20:23:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"},"commit":{"message":"adding image for motivating example","shortMessageHtmlLink":"adding image for motivating example"}},{"before":null,"after":"fe2458c7b0c8ae38af90efb0a04d4e3828d4ada8","ref":"refs/heads/add-motivating-example-graph","pushedAt":"2024-05-27T20:20:54.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"},"commit":{"message":"Adding bidirected edges to ecoli network (#28)","shortMessageHtmlLink":"Adding bidirected edges to ecoli network (#28)"}},{"before":"fe2458c7b0c8ae38af90efb0a04d4e3828d4ada8","after":"4aac46c7bfbd12c1d7068a1df2b1edc1ce0f5997","ref":"refs/heads/revert","pushedAt":"2024-05-25T12:54:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"},"commit":{"message":"Adding original notebooks without utils","shortMessageHtmlLink":"Adding original notebooks without utils"}},{"before":null,"after":"fe2458c7b0c8ae38af90efb0a04d4e3828d4ada8","ref":"refs/heads/revert","pushedAt":"2024-05-25T12:10:34.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"},"commit":{"message":"Adding bidirected edges to ecoli network (#28)","shortMessageHtmlLink":"Adding bidirected edges to ecoli network (#28)"}},{"before":"3399295244b7ebb52cdcaac33bb942b94bafd47a","after":null,"ref":"refs/heads/ecoli_add_bidirected_edges","pushedAt":"2024-05-04T12:00:33.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"}},{"before":"9b724944e49352c23447379195e601ab8975bb25","after":null,"ref":"refs/heads/notebooks_add_bi_edges","pushedAt":"2024-05-04T12:00:02.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"}},{"before":"462df631b539167ce82ba7027d66feac4244fe2b","after":"fe2458c7b0c8ae38af90efb0a04d4e3828d4ada8","ref":"refs/heads/main","pushedAt":"2024-05-04T12:00:02.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"},"commit":{"message":"Adding bidirected edges to ecoli network (#28)","shortMessageHtmlLink":"Adding bidirected edges to ecoli network (#28)"}},{"before":"80ab64d24c11ec6d96f7d41267901c1898733005","after":"9b724944e49352c23447379195e601ab8975bb25","ref":"refs/heads/notebooks_add_bi_edges","pushedAt":"2024-05-03T02:58:02.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"},"commit":{"message":"Resolving invalid notebook for ecoli case study","shortMessageHtmlLink":"Resolving invalid notebook for ecoli case study"}},{"before":"28902f6cffb3cb0cdbecc9cab8b980b4d1bfe73a","after":"80ab64d24c11ec6d96f7d41267901c1898733005","ref":"refs/heads/notebooks_add_bi_edges","pushedAt":"2024-05-02T23:50:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"},"commit":{"message":"ecoli with bidirected edges","shortMessageHtmlLink":"ecoli with bidirected edges"}},{"before":"1c24035b24601beb0b33424a710b941290ba975a","after":"28902f6cffb3cb0cdbecc9cab8b980b4d1bfe73a","ref":"refs/heads/notebooks_add_bi_edges","pushedAt":"2024-04-30T14:20:03.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"},"commit":{"message":"Latest changes from main (#27)","shortMessageHtmlLink":"Latest changes from main (#27)"}},{"before":"f218087ba85e4898fd2972321d739b327ceb54e7","after":null,"ref":"refs/heads/support_max_conditions","pushedAt":"2024-04-30T14:13:10.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"}},{"before":"1c24035b24601beb0b33424a710b941290ba975a","after":"462df631b539167ce82ba7027d66feac4244fe2b","ref":"refs/heads/main","pushedAt":"2024-04-30T14:13:09.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"},"commit":{"message":"Adding support for max_conditions (#26)","shortMessageHtmlLink":"Adding support for max_conditions (#26)"}},{"before":"58f8ab2e7b919658d44e0acd0b0293e2664e9abd","after":"f218087ba85e4898fd2972321d739b327ceb54e7","ref":"refs/heads/support_max_conditions","pushedAt":"2024-04-30T01:43:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"},"commit":{"message":"Removing .idea","shortMessageHtmlLink":"Removing .idea"}},{"before":"118be38c5009d442c2c0ab86f5976fc74d7f01c6","after":"58f8ab2e7b919658d44e0acd0b0293e2664e9abd","ref":"refs/heads/support_max_conditions","pushedAt":"2024-04-30T01:40:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"},"commit":{"message":"lint changes","shortMessageHtmlLink":"lint changes"}},{"before":"1c24035b24601beb0b33424a710b941290ba975a","after":"118be38c5009d442c2c0ab86f5976fc74d7f01c6","ref":"refs/heads/support_max_conditions","pushedAt":"2024-04-30T01:34:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"},"commit":{"message":"Adding support for max_conditions","shortMessageHtmlLink":"Adding support for max_conditions"}},{"before":null,"after":"1c24035b24601beb0b33424a710b941290ba975a","ref":"refs/heads/support_max_conditions","pushedAt":"2024-04-30T01:31:54.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"},"commit":{"message":"Add links to case studies","shortMessageHtmlLink":"Add links to case studies"}},{"before":null,"after":"1c24035b24601beb0b33424a710b941290ba975a","ref":"refs/heads/notebooks_add_bi_edges","pushedAt":"2024-04-30T01:13:20.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"},"commit":{"message":"Add links to case studies","shortMessageHtmlLink":"Add links to case studies"}},{"before":"8b868b0f81f18b8c4de32fbb2f415d36d6809eae","after":"3399295244b7ebb52cdcaac33bb942b94bafd47a","ref":"refs/heads/ecoli_add_bidirected_edges","pushedAt":"2024-04-29T06:57:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cthoyt","name":"Charles Tapley Hoyt","path":"/cthoyt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5069736?s=80&v=4"},"commit":{"message":"Update network_validation.py","shortMessageHtmlLink":"Update network_validation.py"}},{"before":"c7a99b40fef73e2a4e824c47e4a47b7e1c3c0090","after":"8b868b0f81f18b8c4de32fbb2f415d36d6809eae","ref":"refs/heads/ecoli_add_bidirected_edges","pushedAt":"2024-04-29T06:55:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cthoyt","name":"Charles Tapley Hoyt","path":"/cthoyt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5069736?s=80&v=4"},"commit":{"message":"Merge from main branch","shortMessageHtmlLink":"Merge from main branch"}},{"before":"18d4dd94d2b823d73fac2f2ded4bc62b15fbde2c","after":"c7a99b40fef73e2a4e824c47e4a47b7e1c3c0090","ref":"refs/heads/ecoli_add_bidirected_edges","pushedAt":"2024-04-26T01:09:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"},"commit":{"message":"Executing cells in ecoli notebook to resolve invalid notebook error","shortMessageHtmlLink":"Executing cells in ecoli notebook to resolve invalid notebook error"}},{"before":"85329ecaaf86be01df5fc148d67bfea1311a8205","after":"18d4dd94d2b823d73fac2f2ded4bc62b15fbde2c","ref":"refs/heads/ecoli_add_bidirected_edges","pushedAt":"2024-04-26T00:52:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pnavada","name":null,"path":"/pnavada","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32356257?s=80&v=4"},"commit":{"message":"Executing cells in ecoli notebook to resolve invalid notebook error","shortMessageHtmlLink":"Executing cells in ecoli notebook to resolve invalid notebook error"}},{"before":"a95274479d95e4faa911c05950a68be468a4ef61","after":"1c24035b24601beb0b33424a710b941290ba975a","ref":"refs/heads/main","pushedAt":"2024-04-25T09:02:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cthoyt","name":"Charles Tapley Hoyt","path":"/cthoyt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5069736?s=80&v=4"},"commit":{"message":"Add links to case studies","shortMessageHtmlLink":"Add links to case studies"}},{"before":"78d5cdda404e2070012789a9725736c11de3ca17","after":null,"ref":"refs/heads/update-y0","pushedAt":"2024-04-25T08:58:15.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"cthoyt","name":"Charles Tapley Hoyt","path":"/cthoyt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5069736?s=80&v=4"}},{"before":"d4888d72107fe144cbd8a3486188af2946a8bcf8","after":"a95274479d95e4faa911c05950a68be468a4ef61","ref":"refs/heads/main","pushedAt":"2024-04-25T08:58:14.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"cthoyt","name":"Charles Tapley Hoyt","path":"/cthoyt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5069736?s=80&v=4"},"commit":{"message":"Update y0 usage and add notebook utils (#25)\n\nThis update does the following:\r\n\r\n1. Externalizes some functionality that has been re-implemented upstream\r\nin `y0`.\r\n - `add_ci_undirected_edges` is now part of `y0`\r\n- `find_all_nodes_in_causal_paths` now has a more performant\r\nimplementation in `y0`\r\n- the actual call to the evans simplification functions from y0 is now\r\nused, which has a much more clean interface.\r\n2. Moves shared code from the case study notebooks into\r\n`eliater.notebook_utils` such that it can be reused. Further, this code\r\nautomatically adds descriptive text as well as more context than was\r\npreviously available in the case study notebooks. There are still some\r\nopen questions about the workflow for interpreting real data - from now\r\non, it makes more sense to implement this in the Python package rather\r\nthan having long runaway notebooks with tons and tons of code\r\n3. the `_adjustment_set` argument was added into the eliater linear\r\nregression to allow for pre-caching inside the notebook workflow\r\n4. update to modernize setup.cfg. This includes the updates based on\r\nhttps://github.com/y0-causal-inference/y0/issues/218 and\r\nhttps://github.com/y0-causal-inference/y0/pull/219","shortMessageHtmlLink":"Update y0 usage and add notebook utils (#25)"}},{"before":"fe16eddb224b95487c2de1525abe91dc3cf7554c","after":"78d5cdda404e2070012789a9725736c11de3ca17","ref":"refs/heads/update-y0","pushedAt":"2024-04-25T08:22:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cthoyt","name":"Charles Tapley Hoyt","path":"/cthoyt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5069736?s=80&v=4"},"commit":{"message":"Update Case_study1_The_Sars_cov2_model.ipynb","shortMessageHtmlLink":"Update Case_study1_The_Sars_cov2_model.ipynb"}},{"before":"3e698a77d192be61a6866cab50f1cec5fd64b564","after":"fe16eddb224b95487c2de1525abe91dc3cf7554c","ref":"refs/heads/update-y0","pushedAt":"2024-04-25T08:21:42.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cthoyt","name":"Charles Tapley Hoyt","path":"/cthoyt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5069736?s=80&v=4"},"commit":{"message":"Clean up testing conf","shortMessageHtmlLink":"Clean up testing conf"}},{"before":"ab057f6876da16373df91b1499ad4af767cfc654","after":"3e698a77d192be61a6866cab50f1cec5fd64b564","ref":"refs/heads/update-y0","pushedAt":"2024-04-25T07:19:59.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"cthoyt","name":"Charles Tapley Hoyt","path":"/cthoyt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5069736?s=80&v=4"},"commit":{"message":"Rerun ecoli notebook","shortMessageHtmlLink":"Rerun ecoli notebook"}},{"before":"96cf1bf2ffccdb74570d4d3853197c64f2a2240a","after":"ab057f6876da16373df91b1499ad4af767cfc654","ref":"refs/heads/update-y0","pushedAt":"2024-04-25T07:01:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cthoyt","name":"Charles Tapley Hoyt","path":"/cthoyt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5069736?s=80&v=4"},"commit":{"message":"Cleanup","shortMessageHtmlLink":"Cleanup"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEVTapvAA","startCursor":null,"endCursor":null}},"title":"Activity ยท y0-causal-inference/eliater"}