diff --git a/CHANGES.rst b/CHANGES.rst index e17e4a11d..a79c79130 100644 --- a/CHANGES.rst +++ b/CHANGES.rst @@ -1,3 +1,46 @@ +1.0 (January 05, 2023) +====================== +This is the first major release of pyAFQ. The API should be stable +from here until the next major release of pyAFQ. +Adds freewater DTI, fiber density maps, VOF and pAF bundles, +and montage and combine bundle visualizations, as well as other +minor additions, fixes, and documentation updates. + * [FIX] Missing underscore in custom tissue property filenames (#944) + * [FIX] finally finish this SLR PR (#937) + * Add fwDTI (#931) + * [FIX] Import tract docs (#936) + * TST: Fixes another failing nightly test by setting the seed. (#932) + * DOC: Fix the random seed for the OR example. (#930) + * TST: Fix a random seed for this test. (#929) + * [FIX] don't resample subject-space ROIs unless user provides something (#919) + * [ENH] Density task (#900) + * Increase inclusion tolerance for pAF; add suffix for cmd_outputs (#921) + * [DOC] add interactive bundle viz to OR example (#861) + * [ENH] Allow pediatric bundledict and template to be accessed from config file. (#923) + * [FIX] Some pediatric bundle dict fixes (#922) + * DOC: Adds an example of visualizations using FURY. (#910) + * [FIX] put afq_metadata.toml in the correct spot (#913) + * [FIX] Updating DIPY tracking params (#911) + * [ENH] VOF endpoints don't include pAF endpoints (#912) + * DOC: Document S3BIDS access examples. (#909) + * [FIX] correctly calculate min / max sl length, update step_size docs (#905) + * Added streamline filtering by primary orientation; other bundle definition fixes (#898) + * [FIX] cmd output only run on our files (#881) + * Set logger levels to INFO (#867) + * [DOC] add pyafq overview desciption (#875) + * Fix nightly tests (#873) + * Upgrade pybids. (#869) + * [ENH] Apply arbitrary command to some/all pyAFQ outputs, more BIDSy names (#853) + * [FIX] only calc subject registration images when necessary (#862) + * RF: Removes key-word argument that is not being used. (#868) + * ENH: add DKI kurtosis fit elements as scalars (#865) + * ENH: add lower triangular scalars from DTI (could be useful for ML)? (#863) + * FIX: Reorder endpoint (#858) + * [FIX] Some ITK map fixes for running with groupAFQ and in CLI (#855) + * [ENH] Add montage and combine bundle to GroupAFQ (#849) + * [DOC] add fatal error when no bundles found at all (#851) + * [ENH] add median bundle len function (#852) + 0.12.2 (July 21, 2022) ====================== This release fixes a critical bug introduced in version 0.11, which