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  • Cambridge, MA

Organizations

@premonit
  • A place to submit conda recipes before they become fully fledged conda-forge feedstocks

    Python 466 Updated Jun 22, 2017
  • Kraken taxonomic sequence classification system

    C++ 58 Updated Jun 20, 2017
  • Accelerated BLAST compatible local sequence aligner.

    C 35 Updated Jun 9, 2017
  • Deployment files related to https://github.com/broadinstitute/viral-ngs

    Shell 2 Updated May 26, 2017
  • Config files for shell

    Emacs Lisp 1 Updated Apr 26, 2017
  • Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency

    Python 25 Updated Jan 26, 2017
  • Viral genomics analysis pipelines

    Python 18 Updated Jan 18, 2017
  • Running snakemake on a UGE cluster

    Shell 2 Updated Dec 1, 2016
  • Unify program resources for command line and cluster execution environment

    Shell 1 Updated Nov 22, 2016
  • Conda recipes for the bioconda channel.

    Shell 359 Updated Sep 20, 2016
  • Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample.

    Python 5 Updated Aug 4, 2016
  • PyCogent: Official repository for software and unit tests

    Python 51 Updated Jul 5, 2016
  • SQL for Humans™

    Python 210 Updated May 5, 2016
  • Krona

    Forked from marbl/Krona

    Interactively explore metagenomes and more from a web browser.

    JavaScript 26 Updated May 4, 2016
  • Merge sorted iterators

    Julia Updated Apr 20, 2016
  • C++ 1 1 Updated Apr 5, 2016
  • Fast composable IO streams

    Julia 10 Updated Mar 10, 2016
  • This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

    Rust 54 Updated Mar 9, 2016
  • A powerful toolset for genome arithmetic.

    C++ 164 Updated Mar 3, 2016
  • Scientific formulae for the Homebrew package manager

    Ruby 916 Updated Mar 2, 2016
  • A fork of Homebrew for Linux

    Ruby 327 Updated Feb 29, 2016
  • 👭 System duplicate formulae for the Homebrew package manager

    Ruby 304 Updated Feb 28, 2016
  • Bioinformatics and Computational Biology Infrastructure for Julia

    Julia 49 Updated Feb 24, 2016
  • S3 transport for APT

    Python 31 Updated Dec 8, 2015
  • Bash script that prevents the screensaver and display power # management (DPMS) to be activated when you are watching Flash Videos fullscreen on Firefox.

    Shell 80 Updated Nov 23, 2015
  • Emacs major mode for editing Snakemake files

    Emacs Lisp 7 Updated Nov 4, 2015
  • salt

    Forked from saltstack/salt

    Infrastructure automation and management system

    Python 3,617 Updated Aug 18, 2015
  • Salt formula for installing SURPI

    SaltStack Updated Aug 15, 2015
  • GOTTCHA

    Forked from poeli/GOTTCHA

    More details and updates can be found in our homepage and LANL-Bioinformatics Github site (https://github.com/LANL-Bioinformatics/GOTTCHA). Please visit our homepage at

    Perl 8 Updated Aug 11, 2015
  • Personal salt states

    SaltStack Updated Aug 10, 2015