yifeng-li/cis-reg_v1_0
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1. process data preprocessData.R 2. use some classes useSomeClasses.R 3. balance data balanceSampleSize.R 4. train trainModel.R 5. predict predictModel.R 6. plot heatMap and paths plotCoefPath.R plotCoefHeatMap.R 7. compute performance, change class labels perform.R testPerform.R writePerformance.R changeClassLabel.R changeClassLabel2.R 8. write prediction to txt, color elements: writePrediction.R getColorforElements.R mergeRegions.R 9. main examples, cross-validation, and prediction mainCV.R visualization: to be finished