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Diffusion Kit
---------------
*A batch processing GUI-interface for DiffusionKit*
.. image:: _images/diffusionkit.png
:align: right
* **D.K. dir**: path of installed DiffusionKit, e.g. :file:`C:/Program Files (x86)/DiffusionKit`
* **id index**: identifier to find unique string for each subject
* **filetype**: files in the filetype will be searched in input directories.
* **4D nifti files**: if the input data is 4D, check this item. Otherwise uncheck.
* **input dirs**: directories can be input either using a :file:`\*.txt` file or spm select window.
* **Choose below options to perform in each directory.**
* eddy correction
* reconstruction--DTI
* tracking--DTI
* reconstruction--HARDI(ODF)
* reconstruction--HARDI(FOD)
Results will be saved in each input directory.
- **Buttons**:
- **S**: Save parameters of the current panel to a :file:`\*.mat` file. The :file:`\*.mat` can be further loaded for the panel or be used in a script processing.
- **L**: Load parameters from :file:`\*.mat` for the current panel.
- **?**: Help information.
**For more information, please visit**
http://diffusion.brainnetome.org/
* **Reference**:
1. Sangma Xie, Liangfu Chen, Nianming Zuo and Tianzi Jiang. DiffusionKit: A Light One-Stop Solution for Diffusion MRI Data Analysis. *Journal of Neuroscience Methods*. vol. 273, pp. 107-119, 2016.