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.. Brant documentation master file, created by
sphinx-quickstart on Fri May 26 16:27:58 2017.
You can adapt this file completely to your liking, but it should at least
contain the root `toctree` directive.
Functional connectivity is calculated as the temporal correlation between pairs of time series extracted from ROIs or voxels.
In BRANT, three methods of preparing ROIs are provided, including drawing spheres/cubes from coordinates, extracting ROIs from an atlas and merging separate ROI files into one number-tagged template.
.. toctree::
:maxdepth: 2