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data Shiny app version Nov 8, 2018
inst/shinyapp Updated vignette with Shiny instructions Apr 12, 2019
man Shiny app version Nov 8, 2018
vignettes
DESCRIPTION Version 1.0.0 Jul 25, 2019
GPL-3
NAMESPACE Shiny app version Nov 8, 2018
README.md Version 1.0.0 Jul 25, 2019

README.md

Interactive exploration of the effect of tissue composition on gene co-expression

Getting Started

Install package:

install.packages("devtools")
devtools::install_github("yunzhang813/simDeNet-R-Package-Shiny")

Launch Shiny application for interactive exploration using pre-uploaded pure cell type data:

library(simDeNet)
runShiny()

Browse vignette for other useful functions included in the pakcage:

browseVignettes("simDeNet")

Citation

Zhang, Y., Cuerdo, J., Halushka, M.K. and McCall, M.N., 2018. The effect of tissue composition on gene co-expression. bioRxiv, p.492223.

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