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| # Generated by roxygen2: do not edit by hand | |
| S3method(applyTransform,default) | |
| S3method(applyTransform,matrix) | |
| S3method(applyTransform,mesh3d) | |
| S3method(classify,CVA) | |
| S3method(classify,bgPCA) | |
| S3method(classify,typprob) | |
| S3method(exVar,lm) | |
| S3method(exVar,mvr) | |
| S3method(export,meshDist) | |
| S3method(fixLMmirror,array) | |
| S3method(fixLMmirror,matrix) | |
| S3method(getTrafo4x4,rotonto) | |
| S3method(meshDist,matrix) | |
| S3method(meshDist,mesh3d) | |
| S3method(mirror,matrix) | |
| S3method(mirror,mesh3d) | |
| S3method(mirror2plane,matrix) | |
| S3method(mirror2plane,mesh3d) | |
| S3method(pcAlign,matrix) | |
| S3method(pcAlign,mesh3d) | |
| S3method(pcaplot3d,nosymproc) | |
| S3method(pcaplot3d,symproc) | |
| S3method(plot,slider3d) | |
| S3method(print,CVA) | |
| S3method(print,bgPCA) | |
| S3method(print,classify) | |
| S3method(print,nosymproc) | |
| S3method(print,pls2B) | |
| S3method(print,symproc) | |
| S3method(print,typprob) | |
| S3method(relaxLM,matrix) | |
| S3method(relaxLM,mesh3d) | |
| S3method(render,matrixDist) | |
| S3method(render,meshDist) | |
| S3method(rotaxis3d,matrix) | |
| S3method(rotaxis3d,mesh3d) | |
| S3method(rotreverse,matrix) | |
| S3method(rotreverse,mesh3d) | |
| S3method(warpmovie3d,matrix) | |
| S3method(warpmovie3d,mesh3d) | |
| export(CAC) | |
| export(CVA) | |
| export(CreateL) | |
| export(NNshapeReg) | |
| export(PCdist) | |
| export(ProcGPA) | |
| export(RegScore) | |
| export(adnormals) | |
| export(align2procSym) | |
| export(angle.calc) | |
| export(angleTest) | |
| export(anonymize) | |
| export(applyTransform) | |
| export(areaSphere) | |
| export(areaSpherePart) | |
| export(armaGinv) | |
| export(arrMean3) | |
| export(asymPermute) | |
| export(barycenter) | |
| export(bindArr) | |
| export(bone1) | |
| export(bone2) | |
| export(bone3) | |
| export(cExtract) | |
| export(cSize) | |
| export(checkLM) | |
| export(classify) | |
| export(closemeshKD) | |
| export(computeTransform) | |
| export(conv2backf) | |
| export(covDist) | |
| export(covPCA) | |
| export(covW) | |
| export(createAtlas) | |
| export(createMissingList) | |
| export(crossProduct) | |
| export(crossp) | |
| export(cutMeshPlane) | |
| export(cutSpace) | |
| export(deform.grid) | |
| export(deformGrid2d) | |
| export(deformGrid3d) | |
| export(equidistantCurve) | |
| export(exVar) | |
| export(export) | |
| export(facenormals) | |
| export(fastKmeans) | |
| export(file2mesh) | |
| export(find.outliers) | |
| export(fixLMmirror) | |
| export(fixLMtps) | |
| export(getFaces) | |
| export(getMeaningfulPCs) | |
| export(getPCscores) | |
| export(getPCtol) | |
| export(getPLSCommonShape) | |
| export(getPLSfromScores) | |
| export(getPLSscores) | |
| export(getTrafo4x4) | |
| export(getTrafoRotaxis) | |
| export(groupPCA) | |
| export(histGroup) | |
| export(icpmat) | |
| export(invertFaces) | |
| export(kendalldist) | |
| export(line2plane) | |
| export(lineplot) | |
| export(list2array) | |
| export(mcNNindex) | |
| export(mergeMeshes) | |
| export(mesh2grey) | |
| export(mesh2obj) | |
| export(mesh2ply) | |
| export(meshDist) | |
| export(meshPlaneIntersect) | |
| export(meshcube) | |
| export(meshres) | |
| export(mirror) | |
| export(mirror2plane) | |
| export(name2factor) | |
| export(name2num) | |
| export(obj2mesh) | |
| export(pcAlign) | |
| export(pcaplot3d) | |
| export(permudist) | |
| export(permuvec) | |
| export(placePatch) | |
| export(plotAtlas) | |
| export(plotNormals) | |
| export(pls2B) | |
| export(plsCoVar) | |
| export(plsCoVarCommonShape) | |
| export(ply2mesh) | |
| export(points2plane) | |
| export(prcompfast) | |
| export(predictPLSfromData) | |
| export(predictPLSfromScores) | |
| export(predictRelWarps) | |
| export(predictShape.lm) | |
| export(proc.weight) | |
| export(procAOVsym) | |
| export(procSym) | |
| export(projRead) | |
| export(qqmat) | |
| export(quad2trimesh) | |
| export(r2morphoj) | |
| export(r2morphologika) | |
| export(ray2mesh) | |
| export(read.csv.folder) | |
| export(read.fcsv) | |
| export(read.lmdta) | |
| export(read.mpp) | |
| export(read.pts) | |
| export(readLandmarks.csv) | |
| export(readallTPS) | |
| export(regdist) | |
| export(regdist.raw) | |
| export(relWarps) | |
| export(relaxLM) | |
| export(render) | |
| export(retroDeform3d) | |
| export(retroDeformMesh) | |
| export(rmUnrefVertex) | |
| export(rmVertex) | |
| export(rotaxis3d) | |
| export(rotaxisMat) | |
| export(rotmesh.onto) | |
| export(rotonmat) | |
| export(rotonto) | |
| export(rotreverse) | |
| export(scalemesh) | |
| export(showPC) | |
| export(skin1) | |
| export(skin2) | |
| export(skin3) | |
| export(skin4) | |
| export(slider2d) | |
| export(slider3d) | |
| export(solutionSpace) | |
| export(sortCurve) | |
| export(symmetrize) | |
| export(tangentPlane) | |
| export(tanplan) | |
| export(tps2d) | |
| export(tps3d) | |
| export(typprob) | |
| export(typprobClass) | |
| export(unrefVertex) | |
| export(updateNormals) | |
| export(vecx) | |
| export(vert2points) | |
| export(warp.mesh) | |
| export(warpmovie2d) | |
| export(warpmovie3d) | |
| export(write.fcsv) | |
| export(write.pts) | |
| import(doParallel) | |
| import(grDevices) | |
| import(graphics) | |
| import(methods) | |
| import(stats) | |
| import(utils) | |
| importClassesFrom(Matrix,dgCMatrix) | |
| importClassesFrom(Matrix,dgeMatrix) | |
| importClassesFrom(Matrix,dsCMatrix) | |
| importClassesFrom(Matrix,dtCMatrix) | |
| importClassesFrom(Matrix,sparseMatrix) | |
| importFrom(MASS,cov.rob) | |
| importFrom(Matrix,as.matrix) | |
| importFrom(Matrix,bdiag) | |
| importFrom(Matrix,cBind) | |
| importFrom(Matrix,crossprod) | |
| importFrom(Matrix,diag) | |
| importFrom(Matrix,forceSymmetric) | |
| importFrom(Matrix,solve) | |
| importFrom(Matrix,sparseMatrix) | |
| importFrom(Matrix,t) | |
| importFrom(Matrix,tcrossprod) | |
| importFrom(Rcpp,evalCpp) | |
| importFrom(Rvcg,vcgClost) | |
| importFrom(Rvcg,vcgClostKD) | |
| importFrom(Rvcg,vcgCreateKDtree) | |
| importFrom(Rvcg,vcgGetEdge) | |
| importFrom(Rvcg,vcgImport) | |
| importFrom(Rvcg,vcgKDtree) | |
| importFrom(Rvcg,vcgRaySearch) | |
| importFrom(Rvcg,vcgSearchKDtree) | |
| importFrom(Rvcg,vcgSphere) | |
| importFrom(Rvcg,vcgUpdateNormals) | |
| importFrom(colorRamps,blue2green2red) | |
| importFrom(foreach,'%do%') | |
| importFrom(foreach,'%dopar%') | |
| importFrom(foreach,foreach) | |
| importFrom(foreach,registerDoSEQ) | |
| importFrom(parallel,detectCores) | |
| importFrom(parallel,makeCluster) | |
| importFrom(parallel,mclapply) | |
| importFrom(parallel,stopCluster) | |
| importFrom(rgl,lines3d) | |
| importFrom(rgl,open3d) | |
| importFrom(rgl,points3d) | |
| importFrom(rgl,rgl.bg) | |
| importFrom(rgl,rgl.bringtotop) | |
| importFrom(rgl,rgl.clear) | |
| importFrom(rgl,rgl.close) | |
| importFrom(rgl,rgl.cur) | |
| importFrom(rgl,rgl.pop) | |
| importFrom(rgl,rgl.snapshot) | |
| importFrom(rgl,rotationMatrix) | |
| importFrom(rgl,shade3d) | |
| importFrom(rgl,spheres3d) | |
| importFrom(rgl,text3d) | |
| importFrom(rgl,translate3d) | |
| importFrom(rgl,wire3d) | |
| useDynLib(Morpho, .registration = TRUE) |