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Log Spacemap Project

= Motivation

At Delphix we've seen a lot of customer systems where fragmentation
is over 75% and random writes take a performance hit because a lot
of time is spend on I/Os that update on-disk space accounting metadata.
Specifically, we seen cases where 20% to 40% of sync time is spend
after sync pass 1 and ~30% of the I/Os on the system is spent updating
spacemaps.

The problem is that these pools have existed long enough that we've
touched almost every metaslab at least once, and random writes
scatter frees across all metaslabs every TXG, thus appending to
their spacemaps and resulting in many I/Os. To give an example,
assuming that every VDEV has 200 metaslabs and our writes fit within
a single spacemap block (generally 4K) we have 200 I/Os. Then if we
assume 2 levels of indirection, we need 400 additional I/Os and
since we are talking about metadata for which we keep 2 extra copies
for redundancy we need to triple that number, leading to a total of
1800 I/Os per VDEV every TXG.

We could try and decrease the number of metaslabs so we have less
I/Os per TXG but then each metaslab would cover a wider range on
disk and thus would take more time to be loaded in memory from disk.
In addition, after it's loaded, it's range tree would consume more
memory.

Another idea would be to just increase the spacemap block size
which would allow us to fit more entries within an I/O block
resulting in fewer I/Os per metaslab and a speedup in loading time.
The problem is still that we don't deal with the number of I/Os
going up as the number of metaslabs is increasing and the fact
is that we generally write a lot to a few metaslabs and a little
to the rest of them. Thus, just increasing the block size would
actually waste bandwidth because we won't be utilizing our bigger
block size.

= About this patch

This patch introduces the Log Spacemap project which provides the
solution to the above problem while taking into account all the
aforementioned tradeoffs. The details on how it achieves that can
be found in the references sections below and in the code (see
Big Theory Statement in spa_log_spacemap.c).

Even though the change is fairly constraint within the metaslab
and lower-level SPA codepaths, there is a side-change that is
user-facing. The change is that VDEV IDs from VDEV holes will no
longer be reused. To give some background and reasoning for this,
when a log device is removed and its VDEV structure was replaced
with a hole (or was compacted; if at the end of the vdev array),
its vdev_id could be reused by devices added after that. Now
with the pool-wide space maps recording the vdev ID, this behavior
can cause problems (e.g. is this entry refering to a segment in
the new vdev or the removed log?). Thus, to simplify things the
ID reuse behavior is gone and now vdev IDs for top-level vdevs
are truly unique within a pool.

= Testing

The illumos implementation of this feature has been used internally
for a year and has been in production for ~6 months. For this patch
specifically there don't seem to be any regressions introduced to
ZTS and I have been running zloop for a week without any related
problems.

= Performance Analysis (Linux Specific)

All performance results and analysis for illumos can be found in
the links of the references. Redoing the same experiments in Linux
gave similar results. Below are the specifics of the Linux run.

After the pool reached stable state the percentage of the time
spent in pass 1 per TXG was 64% on average for the stock bits
while the log spacemap bits stayed at 95% during the experiment
(graph: sdimitro.github.io/img/linux-lsm/PercOfSyncInPassOne.png).

Sync times per TXG were 37.6 seconds on average for the stock
bits and 22.7 seconds for the log spacemap bits (related graph:
sdimitro.github.io/img/linux-lsm/SyncTimePerTXG.png). As a result
the log spacemap bits were able to push more TXGs, which is also
the reason why all graphs quantified per TXG have more entries for
the log spacemap bits.

Another interesting aspect in terms of txg syncs is that the stock
bits had 22% of their TXGs reach sync pass 7, 55% reach sync pass 8,
and 20% reach 9. The log space map bits reached sync pass 4 in 79%
of their TXGs, sync pass 7 in 19%, and sync pass 8 at 1%. This
emphasizes the fact that not only we spend less time on metadata
but we also iterate less times to convergence in spa_sync() dirtying
objects.
[related graphs:
stock- sdimitro.github.io/img/linux-lsm/NumberOfPassesPerTXGStock.png
lsm- sdimitro.github.io/img/linux-lsm/NumberOfPassesPerTXGLSM.png]

Finally, the improvement in IOPs that the userland gains from the
change is approximately 40%. There is a consistent win in IOPS as
you can see from the graphs below but the absolute amount of
improvement that the log spacemap gives varies within each minute
interval.
sdimitro.github.io/img/linux-lsm/StockVsLog3Days.png
sdimitro.github.io/img/linux-lsm/StockVsLog10Hours.png

= Porting to Other Platforms

For people that want to port this commit to other platforms below
is a list of ZoL commits that this patch depends on:

Make zdb results for checkpoint tests consistent
db58794

Update vdev_is_spacemap_addressable() for new spacemap encoding
419ba59

Simplify spa_sync by breaking it up to smaller functions
8dc2197

Factor metaslab_load_wait() in metaslab_load()
b194fab

Rename range_tree_verify to range_tree_verify_not_present
df72b8b

Change target size of metaslabs from 256GB to 16GB
c853f38

zdb -L should skip leak detection altogether
21e7cf5

vs_alloc can underflow in L2ARC vdevs
7558997

Simplify log vdev removal code
6c926f4

Get rid of space_map_update() for ms_synced_length
425d323

Introduce auxiliary metaslab histograms
928e8ad

Error path in metaslab_load_impl() forgets to drop ms_sync_lock
8eef997

= References

Background, Motivation, and Internals of the Feature
- OpenZFS 2017 Presentation:
youtu.be/jj2IxRkl5bQ
- Slides:
slideshare.net/SerapheimNikolaosDim/zfs-log-spacemaps-project

Flushing Algorithm Internals & Performance Results
(Illumos Specific)
- Blogpost:
sdimitro.github.io/post/zfs-lsm-flushing/
- OpenZFS 2018 Presentation:
youtu.be/x6D2dHRjkxw
- Slides:
slideshare.net/SerapheimNikolaosDim/zfs-log-spacemap-flushing-algorithm

Upstream Delphix Issues:
DLPX-51539, DLPX-59659, DLPX-57783, DLPX-61438, DLPX-41227, DLPX-59320

Signed-off-by: Serapheim Dimitropoulos <serapheim@delphix.com>
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sdimitro committed Feb 19, 2019
1 parent f378f42 commit 9c843eed6cec5b34b0ed1784a9ea0827d6b949aa

Large diffs are not rendered by default.

Oops, something went wrong.
@@ -2950,24 +2950,12 @@ vdev_lookup_by_path(vdev_t *vd, const char *path)
return (NULL);
}

/*
* Find the first available hole which can be used as a top-level.
*/
int
find_vdev_hole(spa_t *spa)
static int
spa_num_top_vdevs(spa_t *spa)
{
vdev_t *rvd = spa->spa_root_vdev;
int c;

ASSERT(spa_config_held(spa, SCL_VDEV, RW_READER) == SCL_VDEV);

for (c = 0; c < rvd->vdev_children; c++) {
vdev_t *cvd = rvd->vdev_child[c];

if (cvd->vdev_ishole)
break;
}
return (c);
ASSERT3U(spa_config_held(spa, SCL_VDEV, RW_READER), ==, SCL_VDEV);
return (rvd->vdev_children);
}

/*
@@ -2992,7 +2980,7 @@ ztest_vdev_add_remove(ztest_ds_t *zd, uint64_t id)

spa_config_enter(spa, SCL_VDEV, FTAG, RW_READER);

ztest_shared->zs_vdev_next_leaf = find_vdev_hole(spa) * leaves;
ztest_shared->zs_vdev_next_leaf = spa_num_top_vdevs(spa) * leaves;

/*
* If we have slogs then remove them 1/4 of the time.
@@ -3099,7 +3087,7 @@ ztest_vdev_class_add(ztest_ds_t *zd, uint64_t id)
leaves = MAX(zs->zs_mirrors + zs->zs_splits, 1) * ztest_opts.zo_raidz;

spa_config_enter(spa, SCL_VDEV, FTAG, RW_READER);
ztest_shared->zs_vdev_next_leaf = find_vdev_hole(spa) * leaves;
ztest_shared->zs_vdev_next_leaf = spa_num_top_vdevs(spa) * leaves;
spa_config_exit(spa, SCL_VDEV, FTAG);

nvroot = make_vdev_root(NULL, NULL, NULL, ztest_opts.zo_vdev_size, 0,
@@ -7488,6 +7476,15 @@ ztest_init(ztest_shared_t *zs)

for (i = 0; i < SPA_FEATURES; i++) {
char *buf;

/*
* 75% chance of using the log space map feature. We want ztest
* to exercise both the code paths that use the log space map
* feature and the ones that don't.
*/
if (i == SPA_FEATURE_LOG_SPACEMAP && ztest_random(4) == 0)
continue;

VERIFY3S(-1, !=, asprintf(&buf, "feature@%s",
spa_feature_table[i].fi_uname));
VERIFY3U(0, ==, nvlist_add_uint64(props, buf, 0));
@@ -13,7 +13,6 @@ COMMON_H = \
$(top_srcdir)/include/sys/bptree.h \
$(top_srcdir)/include/sys/bqueue.h \
$(top_srcdir)/include/sys/cityhash.h \
$(top_srcdir)/include/sys/spa_checkpoint.h \
$(top_srcdir)/include/sys/dataset_kstats.h \
$(top_srcdir)/include/sys/dbuf.h \
$(top_srcdir)/include/sys/ddt.h \
@@ -61,6 +60,8 @@ COMMON_H = \
$(top_srcdir)/include/sys/sha2.h \
$(top_srcdir)/include/sys/skein.h \
$(top_srcdir)/include/sys/spa_boot.h \
$(top_srcdir)/include/sys/spa_checkpoint.h \
$(top_srcdir)/include/sys/spa_log_spacemap.h \
$(top_srcdir)/include/sys/space_map.h \
$(top_srcdir)/include/sys/space_reftree.h \
$(top_srcdir)/include/sys/spa.h \
@@ -383,6 +383,7 @@ typedef struct dmu_buf {
#define DMU_POOL_OBSOLETE_BPOBJ "com.delphix:obsolete_bpobj"
#define DMU_POOL_CONDENSING_INDIRECT "com.delphix:condensing_indirect"
#define DMU_POOL_ZPOOL_CHECKPOINT "com.delphix:zpool_checkpoint"
#define DMU_POOL_LOG_SPACEMAP_ZAP "com.delphix:log_spacemap_zap"

/*
* Allocate an object from this objset. The range of object numbers
@@ -769,6 +769,8 @@ typedef struct zpool_load_policy {
"com.delphix:obsolete_counts_are_precise"
#define VDEV_TOP_ZAP_POOL_CHECKPOINT_SM \
"com.delphix:pool_checkpoint_sm"
#define VDEV_TOP_ZAP_MS_UNFLUSHED_PHYS_TXGS \
"com.delphix:ms_unflushed_phys_txgs"

#define VDEV_TOP_ZAP_ALLOCATION_BIAS \
"org.zfsonlinux:allocation_bias"
@@ -49,8 +49,16 @@ int metaslab_init(metaslab_group_t *, uint64_t, uint64_t, uint64_t,
metaslab_t **);
void metaslab_fini(metaslab_t *);

void metaslab_set_unflushed_txg(metaslab_t *, uint64_t, dmu_tx_t *);
void metaslab_set_estimated_condensed_size(metaslab_t *, uint64_t, dmu_tx_t *);
uint64_t metaslab_unflushed_txg(metaslab_t *);
uint64_t metaslab_estimated_condensed_size(metaslab_t *);
int metaslab_sort_by_flushed(const void *, const void *);
uint64_t metaslab_unflushed_changes_memused(metaslab_t *);

int metaslab_load(metaslab_t *);
void metaslab_unload(metaslab_t *);
boolean_t metaslab_flush(metaslab_t *, dmu_tx_t *);

uint64_t metaslab_allocated_space(metaslab_t *);

@@ -107,6 +115,9 @@ uint64_t metaslab_class_get_space(metaslab_class_t *);
uint64_t metaslab_class_get_dspace(metaslab_class_t *);
uint64_t metaslab_class_get_deferred(metaslab_class_t *);

void metaslab_space_update(vdev_t *, metaslab_class_t *,
int64_t, int64_t, int64_t);

metaslab_group_t *metaslab_group_create(metaslab_class_t *, vdev_t *, int);
void metaslab_group_destroy(metaslab_group_t *);
void metaslab_group_activate(metaslab_group_t *);
@@ -24,7 +24,7 @@
*/

/*
* Copyright (c) 2011, 2018 by Delphix. All rights reserved.
* Copyright (c) 2011, 2019 by Delphix. All rights reserved.
*/

#ifndef _SYS_METASLAB_IMPL_H
@@ -357,7 +357,7 @@ struct metaslab {
* write to metaslab data on-disk (i.e flushing entries to
* the metaslab's space map). It helps coordinate readers of
* the metaslab's space map [see spa_vdev_remove_thread()]
* with writers [see metaslab_sync()].
* with writers [see metaslab_sync() or metaslab_flush()].
*
* Note that metaslab_load(), even though a reader, uses
* a completely different mechanism to deal with the reading
@@ -401,7 +401,6 @@ struct metaslab {

boolean_t ms_condensing; /* condensing? */
boolean_t ms_condense_wanted;
uint64_t ms_condense_checked_txg;

/*
* The number of consumers which have disabled the metaslab.
@@ -414,6 +413,8 @@ struct metaslab {
*/
boolean_t ms_loaded;
boolean_t ms_loading;
kcondvar_t ms_flush_cv;
boolean_t ms_flushing;

/*
* The following histograms count entries that are in the
@@ -499,13 +500,34 @@ struct metaslab {
metaslab_group_t *ms_group; /* metaslab group */
avl_node_t ms_group_node; /* node in metaslab group tree */
txg_node_t ms_txg_node; /* per-txg dirty metaslab links */
avl_node_t ms_spa_txg_node; /* node in spa_metaslabs_by_txg */

/*
* Allocs and frees that are committed to the vdev log spacemap but
* not yet to this metaslab's spacemap.
*/
range_tree_t *ms_unflushed_allocs;
range_tree_t *ms_unflushed_frees;

/*
* We have flushed entries up to but not including this TXG. In
* other words, all changes from this TXG and onward should not
* be in this metaslab's space map and must be read from the
* log space maps.
*/
uint64_t ms_unflushed_txg;

/* updated every time we are done syncing the metaslab's space map */
uint64_t ms_synced_length;

boolean_t ms_new;
};

typedef struct metaslab_unflushed_phys {
/* on-disk counterpart of ms_unflushed_txg */
uint64_t msp_unflushed_txg;
} metaslab_unflushed_phys_t;

#ifdef __cplusplus
}
#endif
@@ -24,7 +24,7 @@
*/

/*
* Copyright (c) 2013, 2017 by Delphix. All rights reserved.
* Copyright (c) 2013, 2019 by Delphix. All rights reserved.
*/

#ifndef _SYS_RANGE_TREE_H
@@ -95,6 +95,7 @@ range_seg_t *range_tree_find(range_tree_t *rt, uint64_t start, uint64_t size);
void range_tree_resize_segment(range_tree_t *rt, range_seg_t *rs,
uint64_t newstart, uint64_t newsize);
uint64_t range_tree_space(range_tree_t *rt);
uint64_t range_tree_numsegs(range_tree_t *rt);
boolean_t range_tree_is_empty(range_tree_t *rt);
void range_tree_swap(range_tree_t **rtsrc, range_tree_t **rtdst);
void range_tree_stat_verify(range_tree_t *rt);
@@ -112,6 +113,11 @@ void range_tree_vacate(range_tree_t *rt, range_tree_func_t *func, void *arg);
void range_tree_walk(range_tree_t *rt, range_tree_func_t *func, void *arg);
range_seg_t *range_tree_first(range_tree_t *rt);

void range_tree_remove_xor_add_segment(uint64_t start, uint64_t end,
range_tree_t *removefrom, range_tree_t *addto);
void range_tree_remove_xor_add(range_tree_t *rt, range_tree_t *removefrom,
range_tree_t *addto);

void rt_avl_create(range_tree_t *rt, void *arg);
void rt_avl_destroy(range_tree_t *rt, void *arg);
void rt_avl_add(range_tree_t *rt, range_seg_t *rs, void *arg);
@@ -20,7 +20,7 @@
*/
/*
* Copyright (c) 2005, 2010, Oracle and/or its affiliates. All rights reserved.
* Copyright (c) 2011, 2018 by Delphix. All rights reserved.
* Copyright (c) 2011, 2019 by Delphix. All rights reserved.
* Copyright 2011 Nexenta Systems, Inc. All rights reserved.
* Copyright (c) 2014 Spectra Logic Corporation, All rights reserved.
* Copyright 2013 Saso Kiselkov. All rights reserved.
@@ -42,6 +42,7 @@
#include <sys/fs/zfs.h>
#include <sys/spa_checksum.h>
#include <sys/dmu.h>
#include <sys/space_map.h>

#ifdef __cplusplus
extern "C" {
@@ -1053,6 +1054,7 @@ extern boolean_t spa_suspended(spa_t *spa);
extern uint64_t spa_bootfs(spa_t *spa);
extern uint64_t spa_delegation(spa_t *spa);
extern objset_t *spa_meta_objset(spa_t *spa);
extern space_map_t *spa_syncing_log_sm(spa_t *spa);
extern uint64_t spa_deadman_synctime(spa_t *spa);
extern uint64_t spa_deadman_ziotime(spa_t *spa);
extern uint64_t spa_dirty_data(spa_t *spa);
@@ -1103,6 +1105,7 @@ extern boolean_t spa_trust_config(spa_t *spa);
extern uint64_t spa_missing_tvds_allowed(spa_t *spa);
extern void spa_set_missing_tvds(spa_t *spa, uint64_t missing);
extern boolean_t spa_top_vdevs_spacemap_addressable(spa_t *spa);
extern uint64_t spa_total_metaslabs(spa_t *spa);
extern boolean_t spa_multihost(spa_t *spa);
extern unsigned long spa_get_hostid(void);
extern void spa_activate_allocation_classes(spa_t *, dmu_tx_t *);
@@ -20,7 +20,7 @@
*/
/*
* Copyright (c) 2005, 2010, Oracle and/or its affiliates. All rights reserved.
* Copyright (c) 2011, 2018 by Delphix. All rights reserved.
* Copyright (c) 2011, 2019 by Delphix. All rights reserved.
* Copyright 2011 Nexenta Systems, Inc. All rights reserved.
* Copyright (c) 2014 Spectra Logic Corporation, All rights reserved.
* Copyright 2013 Saso Kiselkov. All rights reserved.
@@ -34,6 +34,7 @@

#include <sys/spa.h>
#include <sys/spa_checkpoint.h>
#include <sys/spa_log_spacemap.h>
#include <sys/vdev.h>
#include <sys/vdev_removal.h>
#include <sys/metaslab.h>
@@ -307,6 +308,14 @@ struct spa {
spa_checkpoint_info_t spa_checkpoint_info; /* checkpoint accounting */
zthr_t *spa_checkpoint_discard_zthr;

space_map_t *spa_syncing_log_sm; /* current log space map */
avl_tree_t spa_sm_logs_by_txg;
kmutex_t spa_flushed_ms_lock; /* for metaslabs_by_flushed */
avl_tree_t spa_metaslabs_by_flushed;
spa_unflushed_stats_t spa_unflushed_stats;
list_t spa_log_summary;
uint64_t spa_log_flushall_txg;

char *spa_root; /* alternate root directory */
uint64_t spa_ena; /* spa-wide ereport ENA */
int spa_last_open_failed; /* error if last open failed */
@@ -0,0 +1,77 @@
/*
* CDDL HEADER START
*
* The contents of this file are subject to the terms of the
* Common Development and Distribution License (the "License").
* You may not use this file except in compliance with the License.
*
* You can obtain a copy of the license at usr/src/OPENSOLARIS.LICENSE
* or http://www.opensolaris.org/os/licensing.
* See the License for the specific language governing permissions
* and limitations under the License.
*
* When distributing Covered Code, include this CDDL HEADER in each
* file and include the License file at usr/src/OPENSOLARIS.LICENSE.
* If applicable, add the following below this CDDL HEADER, with the
* fields enclosed by brackets "[]" replaced with your own identifying
* information: Portions Copyright [yyyy] [name of copyright owner]
*
* CDDL HEADER END
*/

/*
* Copyright (c) 2018, 2019 by Delphix. All rights reserved.
*/

#ifndef _SYS_SPA_LOG_SPACEMAP_H
#define _SYS_SPA_LOG_SPACEMAP_H

#include <sys/avl.h>

typedef struct log_summary_entry {
uint64_t lse_start; /* start TXG */
uint64_t lse_mscount; /* # of metaslabs needed to be flushed */
uint64_t lse_blkcount; /* blocks held by this entry */
list_node_t lse_node;
} log_summary_entry_t;

typedef struct spa_unflushed_stats {
/* used for memory heuristic */
uint64_t sus_memused; /* current memory used for unflushed trees */

/* used for block heuristic */
uint64_t sus_blocklimit; /* max # of log blocks allowed */
uint64_t sus_nblocks; /* # of blocks in log space maps currently */
} spa_unflushed_stats_t;

typedef struct spa_log_sm {
uint64_t sls_sm_obj; /* space map object ID */
uint64_t sls_txg; /* txg logged on the space map */
uint64_t sls_nblocks; /* number of blocks in this log */
uint64_t sls_mscount; /* # of metaslabs flushed in the log's txg */
avl_node_t sls_node; /* node in spa_sm_logs_by_txg */
} spa_log_sm_t;

int spa_ld_log_spacemaps(spa_t *);

void spa_generate_syncing_log_sm(spa_t *, dmu_tx_t *);
void spa_flush_metaslabs(spa_t *, dmu_tx_t *);
void spa_sync_close_syncing_log_sm(spa_t *);

void spa_cleanup_old_sm_logs(spa_t *, dmu_tx_t *);

uint64_t spa_log_sm_blocklimit(spa_t *);
void spa_log_sm_set_blocklimit(spa_t *);
uint64_t spa_log_sm_nblocks(spa_t *);
uint64_t spa_log_sm_memused(spa_t *);

void spa_log_sm_decrement_mscount(spa_t *, uint64_t);
void spa_log_sm_increment_current_mscount(spa_t *);

void spa_log_summary_add_flushed_metaslab(spa_t *);
void spa_log_summary_decrement_mscount(spa_t *, uint64_t);
void spa_log_summary_decrement_blkcount(spa_t *, uint64_t);

boolean_t spa_flush_all_logs_requested(spa_t *);

#endif /* _SYS_SPA_LOG_SPACEMAP_H */
@@ -24,7 +24,7 @@
*/

/*
* Copyright (c) 2012, 2018 by Delphix. All rights reserved.
* Copyright (c) 2012, 2019 by Delphix. All rights reserved.
*/

#ifndef _SYS_SPACE_MAP_H
@@ -72,6 +72,11 @@ typedef struct space_map_phys {
* bucket, smp_histogram[i], contains the number of free regions
* whose size is:
* 2^(i+sm_shift) <= size of free region in bytes < 2^(i+sm_shift+1)
*
* Note that, if log space map feature is enabled, histograms of
* space maps that belong to metaslabs will take into account any
* unflushed changes for their metaslabs, even though the actual
* space map doesn't have entries for these changes.
*/
uint64_t smp_histogram[SPACE_MAP_HISTOGRAM_SIZE];
} space_map_phys_t;
@@ -209,6 +214,8 @@ void space_map_histogram_add(space_map_t *sm, range_tree_t *rt,
uint64_t space_map_object(space_map_t *sm);
int64_t space_map_allocated(space_map_t *sm);
uint64_t space_map_length(space_map_t *sm);
uint64_t space_map_entries(space_map_t *sm, range_tree_t *rt);
uint64_t space_map_nblocks(space_map_t *sm);

void space_map_write(space_map_t *sm, range_tree_t *rt, maptype_t maptype,
uint64_t vdev_id, dmu_tx_t *tx);
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