GMYC.py Implements the single threshold general mixed Yule coalescent
(GMYC) model which was first proposed by Pons et al
(Sequence-Based Species Delimitation for the DNA Taxonomy
of Undescribed Insects. Systematic Biology, 55(4), 595–609)
This model requires the input tree to be time calibrated
ultrametric tree, in other words, the branch length of the
input ultrametric tree should represent time.
The most commonly used programs for getting an ultrametric
tree are BEAST, DPPDIV and r8s. There is also an R
implementation of this model called "splits" by Tomochika
Fujisawa (http://barralab.bio.ic.ac.uk/downloads.html)
To find out how to use it, type ./GMYC.py
zhangjiajie/pGMYC
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