elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
elmo2-2.hw.elixir-czech.cz
mkdir: cannot create directory '/scratch/kika/job_10587363.meta-pbs.metacentrum.cz': File exists
/storage/brno2/home/kika/.conda/envs/metabinner_env/lib/python3.7/site-packages/sklearn/utils/deprecation.py:144: FutureWarning: The sklearn.cluster.k_means_ module is  deprecated in version 0.22 and will be removed in version 0.24. The corresponding classes / functions should instead be imported from sklearn.cluster. Anything that cannot be imported from sklearn.cluster is now part of the private API.
  warnings.warn(message, FutureWarning)
2022-03-08 13:50:07,627 - Input arguments:
2022-03-08 13:50:07,627 - Contig_file:	/scratch/kika/job_10587363.meta-pbs.metacentrum.cz/scaffolds.fasta
2022-03-08 13:50:07,627 - Coverage_profiles:	/scratch/kika/job_10587363.meta-pbs.metacentrum.cz/coverage_profile.tsv
2022-03-08 13:50:07,627 - Composition_profiles:	/scratch/kika/job_10587363.meta-pbs.metacentrum.cz/kmer_4_f500.csv
2022-03-08 13:50:07,627 - Output file path:	/scratch/kika/job_10587363.meta-pbs.metacentrum.cz/metabinner_res/result.tsv
2022-03-08 13:50:07,627 - Predefined Clusters:	Auto
2022-03-08 13:50:07,628 - The number of threads:	20
Traceback (most recent call last):
  File "component_binning.py", line 403, in <module>
    X_t, namelist, mapObj, X_cov, X_com = gen_X(com_file, cov_file)
  File "component_binning.py", line 79, in gen_X
    compositMat = shuffled_compositMat[covIdxArr]
IndexError: index 4611686018427387904 is out of bounds for axis 0 with size 429659

real	0m44.193s
user	0m7.661s
sys	0m1.346s
Something went wrong with generating component binning results. Exiting.